Pseudomonas sp. MRSN12121: TO66_05050
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Entry
TO66_05050 CDS
T03702
Name
(GenBank) penicillin-binding protein
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
psem
Pseudomonas sp. MRSN12121
Pathway
psem00550
Peptidoglycan biosynthesis
psem01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
psem00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
TO66_05050
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psem01002
]
TO66_05050
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psem01011
]
TO66_05050
Enzymes [BR:
psem01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
TO66_05050
Peptidases and inhibitors [BR:
psem01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
TO66_05050
Peptidoglycan biosynthesis and degradation proteins [BR:
psem01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
TO66_05050
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Beta-lactamase2
Peptidase_S11
Alba
Motif
Other DBs
NCBI-ProteinID:
AJO76687
UniProt:
A0A0C5EF83
LinkDB
All DBs
Position
1134096..1135544
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AA seq
482 aa
AA seq
DB search
MGSAHRFYTRGLGLFLALSLAACASHPGARYAAELEQVLADPALQGATVSLTVRDVESGA
ALYQHNPDSRLIPASSLKLLTTAAALDVLGPDYRFATEVLGDGVQEGERLHGNLYLRGSG
DPSMQAADYRELAAALARSGIRQVSGDLVLDDTAFDDQRLGVDWASDDESLYYAAQISAL
NIAPNADFDAGSVLVSVSAPALPGAPLAVSVSPANRLMSLRNLGRVGTQDSLQVGREHGS
NLLLVSGALPPGQSRRNWVSVWEPTRLVADVFQQALAEQGVTLQGQVRIGQPTAPAARVL
ASHASMPLAGLITPLLKLSNNNMSEVLLKAMGRQTAKAGTAAAGVAAIDGFLRRQGLDPQ
GWVQVDGSGLSRRNQISSQSLSDLLLVARKQPWFATWYAALPVAGDAARMTGGTLRYRLL
GTAAVDNLHAKTGSMQGVSSLSGYLNAADGRRLVLVMLSNNYRVEGARIKALEDRVAQAL
MQ
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgggttcagcacatcgtttctacacccgcgggctgggattgttcctggccctgtcgctg
gcggcttgcgccagtcatcccggtgcccgctacgccgccgagctggagcaggtcctggcc
gacccggcgctccagggcgccacggtgtcgctgacggtgcgcgatgtcgagagcggcgcg
gccttgtatcagcataaccccgacagccggctgatcccggcgtccagcctgaaactgttg
accaccgccgccgcgctggacgtcctcggccccgactatcggttcgccaccgaggtgctg
ggcgatggcgtgcaagagggcgaacgcctgcacggcaacctttatctgcgtggctccggc
gatccgagcatgcaggccgcggattaccgcgaactggcggcggcgctggcgcgcagtggc
atccgccaggtcagcggcgacctggtgctcgacgacaccgccttcgacgaccagcggctg
ggcgtcgactgggccagcgacgatgaaagcctgtattacgccgcgcagatctccgccctc
aatatcgcccccaacgctgacttcgatgccggcagcgtgctggtgtcggtcagcgcgccg
gcgctgccgggagcgccgctggcggtcagcgtcagcccggcgaaccggctgatgagcctg
cgcaatctgggccgcgtcgggacgcaggacagcctgcaggtcggtcgcgagcacggcagc
aacctgctgctggtcagcggtgccttgccgcccgggcagtcgcggcgcaactgggtcagc
gtgtgggagccgacgcgcctggtggcggacgtgttccagcaagcgctggccgagcagggc
gtgacgctgcagggccaggtgcggatcggccagcccacggcgccggcggcgcgggtcctg
gccagccatgcatcgatgccgttggcgggcttgatcacgccgctgctcaagctgtcgaac
aacaacatgtccgaagtgctgctcaaggccatggggcgccagaccgccaaggccggcacc
gcggcggccggggtggcggccatcgacggcttcctgcggcgtcagggcctggacccgcaa
ggctgggtgcaggtggacggctcggggttgtcgcggcgcaaccagatttccagccagagc
ctcagcgacctgttgctggtggcgcgcaagcagccctggttcgccacctggtacgcggcg
ctgccggtggccggcgatgccgcgcgcatgaccggcggcaccctgcgttatcgcctgctg
ggcaccgcggcggtggacaacctgcatgccaagaccgggtcgatgcagggcgtgtcgtcg
ctgtcgggctacctgaacgcggccgacggccggcggctggtgctggtgatgctgtcgaac
aactaccgggtcgagggcgcgcggatcaaggccctggaggatcgggtggcgcaggccttg
atgcagtag
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