KEGG   Pseudonocardia sp. EC080610-09: AD006_00700
Entry
AD006_00700       CDS       T04146                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
pseq  Pseudonocardia sp. EC080610-09
Pathway
pseq03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pseq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AD006_00700
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pseq03400]
    AD006_00700
Enzymes [BR:pseq01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     AD006_00700
DNA repair and recombination proteins [BR:pseq03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     AD006_00700
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: ALL74205
LinkDB
Position
complement(148173..149036)
AA seq 287 aa
MRLATWNVNSAKSRLPRLLPWLDEREPDVVCLQETKLSDDDFAATFDDELAARGYAVAHH
GQGRWNGVAVLSRAGLDDVVRGLPGEPVFSEGGLDVPDARAVTATCGGLRVTSVYVPNGR
EPSDPHYAYKLRWLAALRDQVVAGDPATTVVAGDVNIAPTDDDVWDRSQFDGATHVTPAE
REALAGLVGAGLHDVLRDRWPDERVFTYWDYRAGRFHQDQGMRIDLVLAGEDPAGRRAAV
WVDRKARKGRSPSDHAPVVLDLDSAPDGDTGPVVPPPSAPAPLGGRR
NT seq 864 nt   +upstreamnt  +downstreamnt
gtgcgcctcgccacctggaacgtgaactcggcgaaatcccggctgccgcggctgctgccg
tggctcgacgagcgggagccggacgtcgtctgcctgcaggagacgaagctgtccgacgac
gacttcgccgccaccttcgacgacgagctggccgcgcgcggctacgcggtcgcgcaccac
ggccagggccggtggaacggcgtcgcggtgctgtcccgggccgggctcgacgacgtcgtg
cggggtctgcccggcgagcccgtcttcagcgagggcgggctcgacgtgcccgacgcccgc
gcggtcaccgccacctgcggcgggctgcgggtgacgtcggtgtacgtcccgaacgggcgc
gaaccgtccgacccgcactacgcctacaagctgcgctggctggcggccctgcgcgaccag
gtcgtggcgggcgacccggcgacgaccgtcgtcgccggggacgtgaacatcgcccccacc
gacgacgacgtctgggaccgttcgcagttcgacggcgccacccacgtcacgccggccgag
cgcgaggcgctcgcgggtctcgtcggggccgggctgcacgacgtgctgcgcgaccgctgg
ccggacgagcgggtgttcacctactgggactaccgcgccgggcgcttccaccaggaccag
ggcatgcggatcgacctcgtgctcgccggggaggatcccgcgggccgccgggcggcggtg
tgggtggaccggaaggcacggaagggtaggtcgccgagcgaccacgcacccgtcgtcctg
gacctggactccgccccggacggcgacaccggtcccgtcgtcccgccgccgtccgcgccc
gccccgctgggcgggcgcagatag

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