Pseudomonas sp. TCU-HL1: THL1_5437
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Entry
THL1_5437 CDS
T05373
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pset
Pseudomonas sp. TCU-HL1
Pathway
pset03420
Nucleotide excision repair
pset03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pset00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
THL1_5437
03430 Mismatch repair
THL1_5437
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pset03400
]
THL1_5437
Enzymes [BR:
pset01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
THL1_5437
DNA repair and recombination proteins [BR:
pset03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
THL1_5437
MMR (mismatch excision repair)
Other MMR factors
THL1_5437
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
AAA_30
AAA_11
UvrD_C
ABC_tran
ResIII
AAA_16
KAP_NTPase
DEAD
AAA_31
TrwB_AAD_bind
SRP54
T2SSE
Motif
Other DBs
NCBI-ProteinID:
AOE87984
UniProt:
A0A1B3EES2
LinkDB
All DBs
Position
complement(5891986..5893980)
Genome browser
AA seq
664 aa
AA seq
DB search
MDIGMTPFENIVSCLERGESFVLQGGAGSGKTETLKKLLDYISKHMPEKRVACITHTNLA
ADEIKARAGELHAISTIHSFLNGIINSFRIDLHKVIHELFLLPEFKVGQAMDDDKEYKKR
EHERYKKAYGKYADKAYLILKIKEAKVLGKPMYDKDPQAANTVLNEKIKHLNASVLEHIK
KASPQKVCYNETAFDSFRDLSFGHDGLVKLAVSLMCERKKLRKILADKYDYIFVDEYQDT
SPDIVRAFLDYVVKDQNIVFWFFGDSMQGIYEDGVGDVENYVQADAIEKINKEDNYRCSE
QVVKLINNLRDDGLEQSVAFKTRENGDLETLADRQGRVKLVYAICDDKPTQHSPREDKDS
YLKKLNKLIETARGVDSYKMLMLTNKAVASEAGFSQLYEIFNSRFGQATNENLEKVLAIC
HFSELYELHEDYGNKRYAKVIRFVKKSGFVLDSVFHKDELLVAFKSVFDLNSPAHDAIHE
SFKLKLLKQSDSYERFVRRREEFFEAAMGNSRYSAFKDQYVSGFDSLSKLNKAGFDVDEY
EFGDLERDVKRELFYNDFFGGKITLGEVFKYYDYLSEKTNFITMHKTKGSGIENVLVVAD
EFFWRDYKFGNVFSAGDITAENRKIMYVACSRAIKNLTCVRIMSTEESSTIKDYFNEIEC
VSLD
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atggatatcggaatgactccttttgagaatattgtatcttgcctggaaagaggtgaaagc
tttgtcctgcaaggaggtgctggaagtggaaaaacagaaaccctgaaaaaattgttggat
tacatatctaaacacatgccggaaaaaagagtggcatgtataacacatacaaatttggct
gcggatgaaatcaaggctcgtgcaggagagttgcatgctattagcacgattcattcgttt
ctgaacgggatcatcaactcctttcgtatagatttgcataaagtaatacatgagcttttc
ctattgccagaatttaaagtagggcaagccatggatgacgacaaggagtataaaaagcgc
gagcatgaacgttataaaaaggcatacggaaaatatgcagataaagcataccttattctc
aagataaaagaggccaaggtcttggggaaaccaatgtatgacaaagatcctcaagcggca
aatactgtattaaatgagaaaataaaacaccttaatgcaagtgtgcttgagcatattaag
aaagcttcacctcaaaaggtttgttataacgagaccgcattcgatagttttcgcgattta
agctttggtcatgacgggcttgttaagttggctgtctcgttaatgtgcgaaagaaaaaaa
ttaagaaagatattggctgataagtatgattatatatttgtcgatgagtatcaagatact
tctcctgatatagtcagggcgtttcttgattatgtcgtaaaagaccagaatatagtattc
tggttctttggtgactcgatgcagggaatatatgaggatggcgtcggagatgtagagaat
tatgtgcaagcagatgcgatagagaagataaataaagaggataattacaggtgctcggaa
caggttgtcaagctcattaataacctaagggacgatgggctggaacaaagtgttgcattc
aaaactcgggagaatggagatttagaaaccctggcggaccgccagggtagagtcaagctc
gtttatgcaatttgcgacgataagcctacccagcacagcccacgcgaagacaaagattca
taccttaaaaagcttaataaattgattgaaacggcgcggggtgtcgatagctataagatg
ttgatgttgacaaataaggctgttgcttctgaagctggattcagtcagttgtatgaaata
tttaactctagatttggacaagcaacaaatgagaatttagagaaagtattggcaatatgc
catttttctgagctatatgagttgcacgaagattatggaaataagagatatgcaaaagtc
atccgtttcgtaaaaaaatctggcttcgtattggattcggttttccacaaagatgaattg
ttggtcgcgttcaagagtgtttttgatttgaactctccagcgcatgatgcgatacatgaa
tcgtttaaattgaagctattgaagcaatcggattcgtatgaacggttcgtgagaagaaga
gaagagtttttcgaggctgctatggggaattccaggtactctgctttcaaagatcaatac
gtgtctgggtttgatagtcttagtaagttaaacaaagctggctttgatgttgatgagtat
gagtttggtgatctagagcgtgatgtaaagcgagagctattttataatgatttttttgga
ggaaaaataactctgggtgaagtgttcaagtattatgattatttgtcagagaaaacaaat
ttcataactatgcacaagacgaaaggttcggggatcgaaaacgttttggtggtagcagac
gagtttttttggagggactacaagtttggtaatgttttttcggctggggatataactgcc
gagaatagaaagattatgtatgttgcgtgctctagggctatcaagaatttgacgtgtgtg
cggataatgagcactgaagaatcctcaactatcaaagattatttcaatgagatagaatgt
gtaagtttagattga
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