Thalassoporum mexicanum: Pse7367_0454
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Entry
Pse7367_0454 CDS
T02369
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
pseu
Thalassoporum mexicanum
Pathway
pseu03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pseu00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Pse7367_0454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pseu03021
]
Pse7367_0454
03400 DNA repair and recombination proteins [BR:
pseu03400
]
Pse7367_0454
Enzymes [BR:
pseu01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Pse7367_0454
Transcription machinery [BR:
pseu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Pse7367_0454
DNA repair and recombination proteins [BR:
pseu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Pse7367_0454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
AFY68765
LinkDB
All DBs
Position
571850..575149
Genome browser
AA seq
1099 aa
AA seq
DB search
MNKPTQITPAIALPDLVEIQRESFRWFLEEGLIEELASFSPITDYTGKIELHFVGKDYKL
KKPKYAVDEAKRRDATYSVQMYVPTRLINKETGEIKEQEVFIGDLPLMTDRGTFIINGAE
RVIVNQIVRSPGVYYKSETDKNSRRTYNASLIPNRGAWLKFETDKNDLVWVRIDKTRKLS
AQILLKALGLSDADIFDSLRHPEYFQKTIEKEGQYNEEDALLELYRKLRPGEPPTVAGGQ
QLLESRFFDPKRYDLGRVGRYKINRKLRLNVAETTRVLTPEDILSAINYLINLEYDVGQT
DDIDHLGNRRVRSVGELLQNQVRVGLNRLERIIRERMTVSEADVLTPASLVNPKPLVAAI
KEFFGSSQLSQFMDQTNPLAELTHKRRLSALGPGGLTRERAGFAVRDIHPSHNGRICPIE
TPEGPNAGLIGSLATHARVNQYGFIEAPYLPVEDGLIRYDLTPIYMTADEEDEFRVAPGD
VPMNEEGWITADFVPVRYRQEFGTAEPNDLDYVAVSPVQIISVATSLIPFLEHDDANRAL
MGSNMQRQAVPLLRPERPLVGTGLEAQAARDSGMVIVSRSDGEVIYSSADEIRVKSDDGG
VINYYLQKYQRSNQDTCLNQRPIAARGDRVVKGQILADGSATEGGELALGQNILVAYMPW
EGYNYEDAILINERLVIDDVYTSIHIEKYEIEARQTKLGPEEITREIPNVGEDSLRQLDE
QGIIRVGAWVEAGDILVGKVTPKGESDQPPEEKLLRAIFGEKARDVRDNSLRVPNGEKGR
VVDVRLFTREQGDELPPGANMVVRVYVAQKRKIQVGDKMAGRHGNKGIISRILPKEDMPY
LEDGTAVDIVLNPLGVPSRMNVGQVFECLLGWAGQNKDVRYKITPFDERHGEEMSRNSVH
QQLKEAQRAIGEEWIFNPDNPGKLTVYDGRTGEKFDQPVTVGKAYMLKLVHLVDDKIHAR
STGPYSLVTQQPLGGKAQQGGQRFGEMEVWALEAFGAAYTLQELLTVKSDDMTGRNESLN
AIVKGHAIPRPGTPESFKVLVRELQSLCLDVSVHKLESGDDGSNQDTEVDLMVDMDGRRT
PSRPTYESIYRSEDEETES
NT seq
3300 nt
NT seq
+upstream
nt +downstream
nt
atgaataagcctacacagataactcctgctattgctctaccagatctagtagaaattcag
cgggagagcttccgctggtttctcgaagaaggattaattgaagaacttgctagcttttca
ccgattaccgattacaccggaaaaattgagcttcactttgttggtaaagattataagtta
aaaaagcccaaatacgcagttgatgaagccaagcgtcgtgatgctacctattcggtgcag
atgtacgtgcctacccgcttgatcaacaaagaaacgggtgaaattaaagaacaagaagtc
tttatcggcgatctgcccctcatgaccgatcgcggtacattcattattaatggtgccgag
cgggtaatcgttaatcagattgtgcgtagtcctggtgtctactacaaatctgaaaccgat
aagaacagccgtcgtacctataatgccagcttgatccccaaccggggggcatggctgaaa
tttgaaaccgataagaatgacctggtttgggtgcggatcgacaagacccgcaaactgtca
gcgcagattttactcaaagcactggggctatccgatgccgatatctttgactcgctgcgc
catccggaatatttccaaaaaacgatcgaaaaagaagggcaatataacgaagaagatgcc
ctgctggaactataccgcaagctccgccccggtgaaccgcctacggttgctggtgggcag
caattattagaatcccgcttttttgatcccaagcgctatgacctgggtcgggttggtcgt
tataaaatcaaccgcaagctgcgtttgaatgtggccgaaaccaccagggtgctaacgccg
gaagatattttgtcggcgatcaactatttgattaatttagaatatgacgttggccaaacc
gatgacattgaccacctgggtaatcgccgggtgcgatcggttggtgaactattgcaaaac
caggttagggttggcctgaatcgcctggagcggattattcgggagcggatgactgtttcc
gaagctgatgtgctcacaccagcatcattggtgaaccccaagccattggtagcggcgatc
aaagaattctttggttccagtcagctatcccagtttatggatcaaactaatcccctggcg
gagttgacccataaacgacggctgagtgcccttggccctggcggcttaacccgtgaacgg
gctggctttgcagtgcgcgatattcaccccagtcacaatggccgaatctgcccgatcgaa
acgcctgaaggccctaacgctggtctgattggttcactggctacccatgccagggttaat
caatatggctttattgaagcgccctatctgccagttgaagatggcttaattcgctatgac
ctcacgcctatttatatgacggcggacgaagaggatgagttccgggttgcccctggcgat
gtgcccatgaatgaagagggctggatcacggctgactttgtgccagtgcgatatcgtcag
gaatttggcaccgccgagcccaatgaccttgattacgttgcggtttcaccagtgcagatc
atctcggtggccacatcattaattccattcctggaacatgatgatgctaaccgtgccctg
atgggatcgaacatgcagcggcaagctgtgccattgctacgcccagaaagacctctagtc
ggtactggtttagaagctcaggcagcacgagattccggcatggtaattgtttcgcgctcc
gatggtgaggtgatttactcatctgccgacgagattcgggttaaatccgatgatggtggc
gtaattaattactacttgcagaaatatcaacgctctaatcaagatacctgcctcaatcag
cgaccgatcgctgcccgtggcgatcgcgtggtcaagggtcaaatcctggccgatggttct
gctactgaaggtggtgaattggcgctgggtcaaaatatcctggtggcctatatgccctgg
gaaggctacaactacgaagatgcaatcctgattaatgagcgcctggtaatcgatgatgtc
tatacttcgattcacattgaaaaatatgagatcgaggccagacagaccaagctggggcca
gaggaaattacccgcgaaattcctaacgtgggtgaagactcactgcgtcaattagatgaa
cagggcattatccgcgtcggtgcttgggtagaagctggcgatattctggttggtaaggtt
acgccgaagggtgaatccgatcagccgccggaagaaaagctactcagggcgatctttggt
gaaaaagcaagggatgtgcgcgataactccctgcgcgtacccaatggtgaaaaaggccgc
gtcgttgatgtgcgcttgtttacccgtgagcagggtgatgagttgccgcctggtgccaac
atggtagtacgggtttatgtggctcaaaagcgcaaaatccaagtgggcgacaaaatggct
ggtcgtcacggcaataaggggattatttcccgaattttgcccaaggaagacatgccatac
ctagaagatggcacagcggttgatattgtgctcaatcctctgggtgtaccttcccggatg
aacgttggccaagtgtttgaatgtttgcttggttgggctggccagaacaaagatgtgcgc
tataaaattactccctttgatgaaagacatggggaagaaatgtcgcgcaactctgtacat
cagcagctcaaagaagcccaaagggcgatcggcgaggagtggatctttaatcccgacaac
cccggcaagttgactgtctatgatggtcgtaccggtgagaaatttgaccagccagttacg
gtgggcaaagcctatatgctcaaactggtacacctggttgatgataagattcacgcccga
tcgactggcccatattcactggtaacacaacagcccctgggtggtaaagcccaacagggt
ggtcagcggttcggtgaaatggaagtatgggcattggaagcctttggtgctgcctatacc
ctgcaagagctactcacggtgaagtcggatgatatgaccggacgcaacgagtccctcaat
gcgatcgtaaaaggtcatgcgatcccacgaccaggcacaccggaatcgttcaaggtactg
gtgcgagagctacagtcactctgtttggatgtgtcggtacacaagctggaatccggagat
gatggtagtaaccaggataccgaagttgatctaatggtggatatggatggtcgtcgaact
ccatctcgtcccacctatgaatcaatttatcgctccgaggatgaagagacggaatcctaa
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integrated database retrieval system
