Pseudoclavibacter triregionum: USB125703_01042
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Entry
USB125703_01042 CDS
T07344
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
psev
Pseudoclavibacter triregionum
Pathway
psev00521
Streptomycin biosynthesis
psev00523
Polyketide sugar unit biosynthesis
psev00541
O-Antigen nucleotide sugar biosynthesis
psev01100
Metabolic pathways
psev01110
Biosynthesis of secondary metabolites
psev01250
Biosynthesis of nucleotide sugars
Module
psev_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
psev00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
USB125703_01042 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
USB125703_01042 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
USB125703_01042 (rmlC)
Enzymes [BR:
psev01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
USB125703_01042 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
CAG7844795
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Position
1:1158378..1159007
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AA seq
209 aa
AA seq
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MEIRELKIPGSFEITPRQFGDDRGVFLEWYRFDKLEEALGHPLELKQANTSVSKKGVVRG
IHFADVPPSQAKYVTCTRGAVIDYVIDIRVGSPTFGQWDKVVLDTEDRRAIYISEGLGHC
FVALEDDSTVSYLCSETFNAPREHGINPLCKQVALEFPFPEEELLLSPKDTDAPGLEAAK
EQGLLPTFDLCETYYAELRSKAQAAKVGA
NT seq
630 nt
NT seq
+upstream
nt +downstream
nt
atggagattcgcgaactcaagatccccggatccttcgagatcacgccccgccagttcggc
gacgaccgcggcgtgttcctcgagtggtaccgcttcgacaagctcgaggaggccctcggc
cacccgctcgagctcaagcaggcgaacacctcggtctcgaagaagggcgtcgtgcgcggc
atccacttcgcggacgtcccgccgagccaggcgaagtacgtcacctgcacgcgcggcgcc
gtcatcgactacgtcatcgacatccgcgtcggctcgccgaccttcggccagtgggacaag
gtcgtgctcgacaccgaggaccgccgcgccatctacatctcggagggcctcggccactgc
ttcgtcgcgctcgaggacgactcgaccgtctcgtacctctgctcggagaccttcaacgcc
ccgcgcgagcacggcatcaatccgctctgcaagcaggtcgccctcgagttcccattcccc
gaggaggagctcctcctctcgccgaaggacaccgacgcccccggcctcgaggccgcgaag
gagcagggcctgctcccgacgttcgacctctgcgagacctactacgccgagctccgctcg
aaggcgcaggccgcgaaggtcggtgcctag
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