Polypterus senegalus (gray bichir): 120517044
Help
Entry
120517044 CDS
T08668
Symbol
prox1a
Name
(RefSeq) prospero homeobox protein 1a isoform X1
KO
K20211
prospero homeobox 1
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120517044 (prox1a)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain PROS
120517044 (prox1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HPD
Metal_resist
NifQ
Motif
Other DBs
NCBI-GeneID:
120517044
NCBI-ProteinID:
XP_039595075
LinkDB
All DBs
Position
16:102901856..102993355
Genome browser
AA seq
759 aa
AA seq
DB search
MPDHDSTALLSRQTKRRRVDIGVKRTVGAASVVFSKARATVFSAMNPHGSEQDVECSVVQ
HADSEKSNVLRKLLKRANSYEDAMIPFPGATIISQLLKSNMTKNGGNEASFQGSGLSSTG
SEIHQEDACSNSSRESPPECLSPFSRPTMSQFDIERLSDEHLRAKRARVENIIRGMSHSP
SVTLRGGDNDREGVPQPPSPRESYRENKRKQKLPQQQQQSFQQLVSARKEQKHEERRQLK
LQLEDMQKQLRQLQEKFYQIYDSTDSENDEDGNLSEDSLHSESMDHQALDSTADRSDNEM
SDLDPGHFIDRARALIREHAMVAESEKHKRDGQRGKEQGPASMHTEGKQLAETLKQELNT
AMSQVVDTVVKVFSKPPRPVPQVFPPLQVPPTRFAVNGENPTFHPANPRLQCFGDVILPN
PLDTFGSIQVPSSNDQTEALPLVVRKSSSEQSASAPASASHHHPALHPSPLSATVGFGSA
SFRHPFPLPLMGYPFQNPLGAPSASYPGKDRASPESLDLSRETSSLRTKMSSNHMSHRSC
SPTHTGSTNEGLSLSLIKSECGDLQDMAEISPYSGSTIQEGLSPNHLKKAKLMFFYTRYP
SSNMLKMFFSDVKIYSLKQDKQTEPRWTCSSAQFNRCITSQLIKWFSNFREFYYIQMEKF
ARQAINDGITGTDELNVTRDCELYRALNMHYNKANDFEVPERFLEVAQITLREFFNAIVA
GKDVDPSWKKAIYKVICKLDSEVPEIFKSPNCLQELLHE
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaccatgacagcacagccctcttaagcagacaaaccaagagaagaagagttgac
attggagtgaaaaggactgtaggggcagcatctgtggtgttctctaaagccagagccacg
gttttcagtgccatgaatccccacggttcggagcaggacgtcgagtgctcggtggtgcag
catgcagatagcgagaagtccaacgtgctgcgcaaactgctgaagagggcaaactcctat
gaagatgccatgatccccttcccgggcgccaccatcatctcccagctgctgaaaagcaac
atgaccaaaaacggtggcaacgaggccagcttccaaggcagcgggctctccagcacgggc
tccgaaatccaccaggaggatgcgtgcagcaactcttctcgagagagccccccagagtgt
ctctcccccttcagcaggcccaccatgagccagtttgatatcgagcggcttagcgacgag
cacctgagagccaagagggcgcgagtggagaacataatccgtggcatgagccactctccc
agcgtcacgctgcgcggtggtgacaacgaccgagagggggtcccgcagccccccagcccc
cgggagagctatcgggagaacaagcgcaagcagaagctgccgcagcagcagcagcagagc
ttccagcagctcgtctcggccaggaaggagcagaagcacgaggagcgccggcaactgaag
ctgcagctggaggacatgcagaagcagctgcgccagctgcaggagaagttttaccaaatc
tacgacagcaccgattccgaaaacgacgaggatggaaatttgtcggaggacagtttgcac
tcggagagcatggaccaccaggccctggactccaccgccgacaggtcggacaacgagatg
tctgacctggaccccgggcacttcatcgaccgggcccgggcgctcatcagggaacacgcg
atggtagcagagagtgagaagcacaagagagacgggcagaggggcaaggagcaggggcca
gcgtccatgcacacggaaggaaagcagctggccgagactctgaaacaggaactgaacacc
gccatgtcgcaggtggtggacacggtggtcaaggtgttttccaaaccgccacgcccagtc
cctcaggtcttcccacctcttcaggtgcctccgacccgctttgcggtcaatggggagaac
cccaccttccaccccgccaatccgcggctgcagtgcttcggtgatgtcatccttcccaac
cccctcgacacctttggcagcatacaggtccccagttccaatgaccagacagaagcgctg
cccctggtggttcggaagagttcctccgagcagtctgcctctgccccggcctccgccagc
caccaccaccctgccctgcacccctcgccattgtcggcaacagtgggctttggctcggcc
tccttccgccacccctttccccttcctctcatgggatacccctttcagaaccctttaggt
gccccttcggcatcctatccgggcaaggacagggcctctccggaatccttggacttgtcc
agagaaaccagcagcctgcggaccaagatgtcatcaaaccacatgagccatcgctcttgt
tcaccaacacacacgggcagcaccaacgagggcctgtcgttgtccctaataaagtccgag
tgtggggacctccaagacatggcagagatatcgccttattcaggaagtacaattcaggaa
ggactttcgcctaatcacttgaaaaaggcaaagctgatgtttttttacacgaggtatccc
agctccaatatgctgaagatgttcttttcggatgtcaagatatattccttaaaacaagat
aagcagacagagccacggtggacttgttcaagtgcacagttcaaccgatgcatcacctca
caactcatcaagtggttcagcaacttccgagaattctactacattcaaatggagaagttt
gcgaggcaagccattaatgatggcatcacagggactgatgaactgaatgtcacccgggac
tgcgagttgtaccgcgccctcaatatgcactacaacaaggcgaacgactttgaggttccg
gagcgattcctggaagtggctcagatcacattacgagagtttttcaatgccattgttgca
ggcaaagatgttgatccttcctggaagaaggccatatacaaggtcatctgcaagctggac
agtgaagttcctgagatttttaaatcacccaactgtctgcaagagcttctgcatgagtaa
DBGET
integrated database retrieval system
