Polypterus senegalus (gray bichir): 120518748
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Entry
120518748 CDS
T08668
Symbol
abcd4
Name
(RefSeq) ATP-binding cassette sub-family D member 4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex02010
ABC transporters
psex04146
Peroxisome
psex04977
Vitamin digestion and absorption
psex04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120518748 (abcd4)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120518748 (abcd4)
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
120518748 (abcd4)
04980 Cobalamin transport and metabolism
120518748 (abcd4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psex04131
]
120518748 (abcd4)
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psex02000
]
120518748 (abcd4)
Enzymes [BR:
psex01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
120518748 (abcd4)
Membrane trafficking [BR:
psex04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
120518748 (abcd4)
Transporters [BR:
psex02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
120518748 (abcd4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
ArsP_1
AAA_16
AAA_30
AAA_22
AAA_7
FtsK_SpoIIIE
DEAD
AAA_SelU
TsaE
NACHT
AAA_5
T2SSE
bpMoxR
AAA_18
AAA_29
Motif
Other DBs
NCBI-GeneID:
120518748
NCBI-ProteinID:
XP_039597627
LinkDB
All DBs
Position
18:41489264..41522214
Genome browser
AA seq
601 aa
AA seq
DB search
MPPVGKRLRRPKLDRQFLRRFCNIQKILFPSWTSQNVLMFATLLFVTLSEQMIIYQVGII
PSKFYGVLANKDFAGFKNLTLFAVLLIFMNSTLKSMDQYISNLMYVSWRKSLTECLHRHY
FQDRVYYTLNVLHKDIDNPDQRISQDVERFCKQLSTMASRLIISPFTLAYYTFQCFYSSG
WMGPVSIFFYFVIGSIVNKVLMGPIVHTLVLQEKLEGDFRFKHMQIRVNAESAAFYRAGK
VEHMRTNRRLGSLLETQKNLMTKELWLCIGVNTFDYFGSILSYMVIAIPIFAGVYDALTP
GELSSLISKNAFVSIYLINCFSQLIDLSSTVSDVAGYTHRIGELHETMQKLERKHCDSSG
GGYDLNSDLEVSNTPVDIAFILQKLSYKSPCSDEPLVKDLTLKIVHGTNILVVGNTGTGK
TSLLRVLNKLWDCTSGSFQMLSSFGPHGILFLPQKPYFTDGTLREQVIYPLKNVYPVSGS
IDDARIIRFLEVAGVDNLLKRTGGLDQVVDWNWYDMLSPGEMQRLSFARLFYLQPRFAVL
DEATSALTEEAEEHLYRACIQLGMTLISLGHRSSLKKFHDLMLKLCGNGEWQLKKIEKDS
S
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atgccaccggtgggcaaaagactccgaagacccaaactggacaggcagtttctgagaaga
ttttgcaacattcaaaaaatactttttccatcatggacgtctcaaaatgtgctgatgttt
gcaactctcctctttgttactttatctgaacagatgattatttaccaggtgggaataatt
ccaagcaagttttatggagtcctggctaacaaggattttgctggatttaagaatttgact
ctgtttgctgtgctcctcatttttatgaattcaactctcaaaagcatggatcagtacatt
tccaatctgatgtatgtcagctggcggaagagtctaaccgaatgtcttcatcggcattat
tttcaggatcgagtttactacacactcaatgttctgcacaaagacattgataacccagac
cagagaataagtcaggatgtggaacgcttttgcaaacaactgagcacgatggctagtagg
ctgatcatctcacccttcacactggcatactatacgtttcagtgtttttatagttcaggc
tggatgggtccagttagtattttcttctattttgtcattgggtccatagtgaacaaggta
ttgatgggaccaattgtgcacacattagtacttcaagaaaaactggaaggagacttcagg
tttaagcatatgcagatccgggtcaatgcagaatcggcagccttttacagggctggaaaa
gtagaacatatgaggaccaacaggcggcttggatccctcctggaaacgcaaaaaaatcta
atgacaaaggagctttggctgtgcattggagtaaacacatttgattatttcggaagtatt
ctgagttacatggttattgctattccaatatttgctggggtctatgatgcccttactcct
ggagagctcagcagtttaattagcaagaatgcttttgtctccatctacctcattaactgt
ttcagtcaactgattgatttgtcttctacagtatcagatgtcgctggctacacacacagg
attggagagcttcatgaaactatgcagaaacttgaaaggaagcattgtgactcctcagga
ggtggctatgacttaaatagtgacttggaggtgtcaaacactcctgtagacattgctttc
atccttcagaaactgtcatacaaatccccctgctccgatgagccgctagtaaaagacctg
actctgaaaattgtccatggaaccaacattctggtggtgggcaatacgggcactgggaag
acatccttgttgcgagttctgaataaactatgggactgcactagtgggtcatttcagatg
ctgtcctcttttggacctcatggaattttattcctgccccagaaaccatattttacagat
gggacactacgagaacaggtcatatatccattgaagaatgtatatcctgtgtcaggttcc
atcgatgatgcaagaattatacgttttttggaggttgctggcgtggataaccttttaaaa
agaacaggaggactggaccaagtagttgactggaactggtatgacatgctgtctccagga
gaaatgcagaggctgtcttttgctagactgttttatctgcagcccagatttgcagtcctt
gatgaggcaacaagtgctttgacagaggaggcagaagagcacttgtatagagcctgtatt
cagcttggaatgaccttaatcagtcttggccaccgcagcagcctgaaaaagtttcatgac
ttgatgttgaagctctgtggtaatggagaatggcagcttaagaaaattgaaaaggactca
agctaa
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