Polypterus senegalus (gray bichir): 120523314
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Entry
120523314 CDS
T08668
Name
(RefSeq) collagenase 3-like
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
psex
Polypterus senegalus (gray bichir)
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
psex01002
]
120523314
Peptidases and inhibitors [BR:
psex01002
]
Metallo peptidases
Family M10
120523314
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GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_4
Metallopep
Reprolysin_5
DUF4953
Peptidase_M66
Peptidase_M54
Motif
Other DBs
NCBI-GeneID:
120523314
NCBI-ProteinID:
XP_039600458
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All DBs
Position
2:complement(123366260..123372885)
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AA seq
470 aa
AA seq
DB search
MLSFELLVFALFVAGGYAIPVLPDTSKQNDGQLAQDYLRRFYNLSSAPGDHLKRSSGQFA
KKLKEMQEFFGLKVTGKLDTETIQKMKTPRCGVPEVASYSTFPTQLKWPTNYLTYRIENY
TPDISKADVDKAISHAFEVWTEVTPLKITRIYSGTADIVISFVYGDHGDNSPFDGHEGIL
AHAFAPSPGIGGDTHFDEAESFSTGTSGYCLFLVAAHEFGHALGLSHSKDPGALMYPTYS
YVNLETFTLSSDDIEGIQVLYGPNPDKHPQQPAPPKTPSACDTSLVLDAATTFRGETMFF
KDRFLWRKSPGSVEVEQTTIKTFWPELPDKVDAVYESFVWDTIFVFKGKRVWGLQGYDIL
QGYPRSIQKFGFPPKVKKVDAALYIEQTRKTLFFVGTHYYSYDETSKKMEKGYPKLIKAD
FPGIGGQVNAALESNGIMYLFNGPRIFEYDFQSKKVLGVLNGNYFLGCQK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgctgtcttttgagcttctcgttttcgctctttttgtggcaggagggtatgccatccca
gtccttccagacacctctaaacaaaatgacggccaactagcacaggattatctacgcagg
ttctacaatctctcaagtgcacctggagatcacttaaaacgaagcagtggacaatttgca
aaaaaacttaaagaaatgcaggagttttttggcttgaaggtgactggaaaattagatact
gaaacgattcagaagatgaaaacacccagatgtggggtacctgaggtggcttcatactct
acatttccaacacaactaaagtggccaacaaactatctgacttacagaattgaaaactac
acacctgatatttctaaagctgatgtagacaaagcaataagtcatgcatttgaagtttgg
actgaagttaccccactaaaaatcaccagaatctacagtggaacagctgacattgtgatc
tcctttgtttatggagaccatggtgacaattccccctttgatggtcatgaaggaatactc
gctcatgcttttgcaccttcaccaggcattggcggagacacacactttgatgaagctgag
tccttttccactggcacatcaggatactgtttatttctcgtggctgcccatgagtttggt
catgctttaggcctgtcacactcaaaagatccaggtgccttgatgtacccaacctatagc
tacgtcaacctagaaacttttactttgtcaagcgatgatattgaagggattcaggtttta
tatgggcctaatcctgacaaacatccacaacaaccagctccaccaaaaactcccagtgca
tgtgataccagcttggttttagatgcagcgaccacttttcggggggaaacaatgtttttt
aaggacaggttcctctggcgcaagagccctggtagtgtagaagttgaacagaccaccatc
aaaaccttttggccagaacttcctgacaaagttgatgcagtgtatgagagcttcgtatgg
gatacaatatttgtatttaaaggaaagagggtttggggtctgcaaggttatgatatctta
caaggctatccaagaagtatccagaaatttggattcccaccaaaagtgaaaaaggtcgat
gctgcattgtacattgaacagactcgaaagactttgttctttgttggaactcattattac
agttatgatgagacaagtaaaaaaatggaaaaaggctaccccaaattaataaaagccgac
ttcccaggaattggtggacaagttaatgctgctttagaaagcaatggtatcatgtatctc
ttcaatggtccaagaatatttgaatatgactttcagtcaaagaaagtgcttggtgtttta
aatggaaattactttcttggttgccaaaaataa
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