Polypterus senegalus (gray bichir): 120527865
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Entry
120527865 CDS
T08668
Symbol
uvssa
Name
(RefSeq) UV-stimulated scaffold protein A isoform X1
KO
K23720
UV-stimulated scaffold protein A
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
120527865 (uvssa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psex03400
]
120527865 (uvssa)
DNA repair and recombination proteins [BR:
psex03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
120527865 (uvssa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
YnhH-like
Motif
Other DBs
NCBI-GeneID:
120527865
NCBI-ProteinID:
XP_039607706
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Position
4:complement(185981150..186106374)
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AA seq
740 aa
AA seq
DB search
MDNQKRETLSTLVEELTTSGQPQLDSSKMKQLKQICKSSNEYIDHIYHLIMTQLNEDHAE
IRLSAFQIADELFARSHHFRSLLVSNFQEFLELTVETDPAEQPLPPPKEAAQKLKIMAIK
SVQEWQSKYGEAYKKLAVGYNFLRHVKKVDFNDVEARTLAERKKAEEKQKRLENIYKDKV
CKVEKEMGEMASEIQECLTEIDNCFKLLLLDPADFTLDDFIPSSYKQNNFEKSTSTQLIS
NKQLVPPDIDIDDEVPCCSKDLLPMSMSSEDRKVSEPTVKHMANQQTKDSSDDESDTEQN
SGHDNETFLRNNGIISYKYSLDLDISSGLNINENENNEAVVATIRDLHRLITTKLLPSVQ
SWIQIFTKAGINDDRMKRAIDFKKALEIAIKKHEDLHINYKRRERKVLKASHDDDEEEEE
DDDFEEVPEKEGFEPTIPDHLREEYGLEPSQKVVMQTAAPDPPPRPKRRDNSEEMDPTCA
AATLKIFRNKLQSSLSSSMSKASESILSSPKASTESKKQDQESAAPVIPFGLDLYYWGED
QPTAGRILKFSSQHQFWVPHEVEEEVENKELAAMMKTRYITFAGKFEPVKHKCKAPMPNG
SLCERQDRVKCPFHGLIVPRDDLGNPTNPEDIVRLEKEKKAKQEAQPDWRDPEMMREIEA
ATGVDLGSAKNFGKGKGSGKAKKRKYPNLTDLKKRSNTTRSRLEKRVFNKAAVKRVTEAM
NRIDSRKHEKFSNQFNYALN
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggacaatcaaaagcgggagacactttccactctagtagaggagctgaccacctcagga
caaccccaacttgattcttctaaaatgaagcagctgaaacaaatatgcaaatcttctaat
gaatatattgatcatatctaccacttaatcatgacccagttaaatgaagaccatgcagag
attcgcttgtccgcatttcaaatagcggatgaactttttgctaggtcacaccatttccga
tctcttcttgtctccaattttcaagaattcctggaactaacggttgagacagaccctgct
gaacagcctctccctccacctaaggaagctgctcagaaactgaagataatggccataaag
tcagtacaagaatggcagagcaagtatggagaagcctacaagaagcttgctgtagggtac
aattttctaaggcatgttaaaaaggttgatttcaatgatgtagaagctaggactctggca
gaaaggaagaaagcagaagaaaaacagaagaggcttgaaaacatatacaaggataaagtt
tgtaaagttgaaaaagaaatgggagaaatggcctcagagattcaggaatgtctgactgaa
attgacaattgctttaagcttctgttgttggatcctgctgattttactttggatgatttt
ataccctcatcatacaaacaaaataattttgaaaagtctacatctactcagttgataagt
aataagcagttggtcccgcctgatattgatattgatgatgaagtgccatgttgtagtaag
gatcttctacctatgtccatgtcgtcagaagacaggaaagtaagtgagcccactgtaaag
cacatggccaaccagcaaactaaggatagcagtgatgatgagtctgatactgagcaaaat
tctggccatgataatgaaacattcctccggaataatggcattatttcatataaatacagc
cttgatctggacatatcctcaggtttaaacattaatgagaatgaaaacaatgaagcagtg
gttgctaccatacgagacttgcatagattaattacgactaagcttttgccttcagttcag
tcttggattcagatatttactaaagctggaataaatgatgaccgaatgaaacgtgctatt
gatttcaaaaaagcattagaaatcgccattaagaaacatgaagatctacatattaattat
aaacggagagagagaaaagtgttgaaagcaagtcatgatgatgatgaggaggaggaggag
gatgatgattttgaagaagttcctgaaaaagaaggttttgaaccaactataccagaccac
ctacgtgaggaatatggccttgaaccttctcaaaaagtggtaatgcagacagctgctcct
gaccccccaccacgaccaaagaggagggataacagtgaagagatggatccaacttgtgct
gcagccacattaaagatctttaggaacaaactgcaatcttccctttcttcaagcatgtct
aaagcatctgagtcaatactttcttcaccaaaagccagcactgagtcaaaaaaacaggat
caggagtctgcagcaccagtcattccatttgggctagatctctactactggggagaagat
caacctacagcaggtagaatacttaagtttagctcccagcatcagttctgggtgccacat
gaagtagaagaggaagtggaaaataaggaacttgcagccatgatgaagacaaggtatatc
acatttgctggaaaatttgagcctgtaaagcacaaatgcaaagcgcccatgcctaatggt
tctctgtgtgagcgccaagatcgtgtcaaatgtcctttccatggacttattgttcctcga
gatgacttagggaatccaaccaaccctgaagacattgttcgacttgaaaaagagaagaaa
gcaaaacaagaggctcagccagattggagagacccagaaatgatgagagaaattgaagct
gctactggagtggatctaggctccgcaaagaactttggaaaaggaaaaggctcaggaaag
gcaaagaagagaaaatatcctaacctcactgatcttaaaaaaagatcaaatacaacgagg
tcaagattggagaaaagagtatttaacaaagcggcagtgaaacgcgtgacggaagccatg
aacaggattgattcgaggaagcatgaaaagttttccaaccagtttaactatgcattgaat
taa
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