Polypterus senegalus (gray bichir): 120535398
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Entry
120535398 CDS
T08668
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1-like isoform X1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
120535398
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psex04040
]
120535398
Ion channels [BR:
psex04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
120535398
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
120535398
NCBI-ProteinID:
XP_039619151
LinkDB
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Position
9:complement(70320975..70430032)
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AA seq
819 aa
AA seq
DB search
MSKPKPDLELNHLVRESSSQPSSPKLSTANNTSHLPNVPNFSPSSGNQFPLQSQMSGVVN
PSFSKEEGPNNWPRGNSKVGPHPAVNVEDVDSDVDNSSTNRSQPVPRALTPASSYKSKTL
TVPGVPISIRRKKLYSQGDSTDDCETPVHAWPSQSSLQTDDGDKERPPSVTSQSSAIVTE
RLQELVRLFKDRTEKVKEKLIDPESSSEDESPSASPAKPAPSAPAPPTEEPKPEEGKIAP
KEEEHYCEMMCCKFKTMPWMRRAKKWSFPDSIDPFTNLIYVLWLFFVTLAWNWNVWLIPV
RCTYPYQTPDNIYIWLAVDYLCDFIYIIDMFLFQTRLQFVRSGDIITDKKEMRDNYLKSF
KFKMDMLSLIPLDFLYFKVGVNSLLRLPRLLKYMSFFEFNDRLEAILSKAYIYRVIRTTT
YLLYSLHCNSCLYYWASDYEGIGSTRWTYTGRGNSYIRCYYFAVKTLITIGGLPHPVTLF
EITFQLLNYFSGVFAFSIMIGQMRDVVGAATAGKTYYRAYMDGTIKYMSNYKISKDVQNR
IKTWYEYTWKSQGMLDEQELLVQLPDKMRLDIAVDVSYSIVSKVPLFQGCDLQMIYDMLK
RLRSVVYLPGDYVCKKGEIGRAMYIIKDGEVQVLGGPDGKTVLVTLRAGSVFGEISLLSV
GGGNRRTANVVAHGFANLFILDKKDLNDILIHYPESQKLLRKKAKKMLNKNQKTKEAAEK
AKHVIRPRAETPKLLQVAVAASKQSGIEGSLTRIQPRLQKSSSLEPSTSLKQTPSPQGMA
EDDNQDAVSVSSDSSTLNSTRGKNLSVEVSAEEKETSKK
NT seq
2460 nt
NT seq
+upstream
nt +downstream
nt
atgtctaagccaaagccagacctggagttaaaccatctagtacgtgaatcctcttcacag
ccttccagtcctaagctctctacggccaacaatacatcacatctccccaacgttcccaac
ttcagcccgtccagtggcaatcagtttccacttcaaagccagatgtcaggtgtggtcaac
cccagcttttctaaggaagagggtcccaacaactggcctagagggaattctaaagtgggc
cctcaccctgctgttaatgtagaagatgttgattctgatgtagacaacagcagcaccaat
agatctcagccagttccccgtgccctcacaccagcttcatcttacaagagcaagacactg
actgtgccaggggttcctatctcgattcgaaggaagaagctctattcacaaggtgacagt
actgacgattgtgagacaccagtccatgcttggcctagtcagtccagcctgcaaaccgat
gacggggacaaagaacgaccaccatctgtgaccagccaatccagtgcaattgttactgag
cgccttcaggagcttgtcagactgttcaaggataggacagaaaaagtgaaggaaaaacta
atagaccccgagtcctcctcagaagatgaaagcccctcagcatctccagcaaagccagcc
ccttctgctcctgcaccaccgacagaggagccaaaaccggaggaaggaaaaatagcacca
aaggaggaagaacattactgtgaaatgatgtgctgcaagttcaagaccatgccctggatg
cgacgggcgaagaaatggagtttccctgatagcattgacccatttaccaacctcatttat
gtcctgtggctgttctttgtgactttggcctggaattggaatgtgtggttgatccccgta
aggtgcacttacccctaccagacccctgataatatctatatctggctggctgtggactac
ttgtgcgacttcatctacatcattgatatgttcctctttcagacacgtctgcagtttgtg
cggagcggggacattattactgataaaaaagaaatgagagacaattatttgaaatccttc
aaattcaagatggatatgctttcactcattcctctggacttcctatattttaaggttgga
gtgaattctcttctacgactgccacgtctgttaaagtacatgtctttctttgagtttaat
gatcgtctggaggcaattctgagcaaagcttacatctacagagtcatcagaacaacaacc
tacctcctgtactctttacactgcaattcctgtctctactactgggcatctgactatgaa
gggatcggatcaacccgttggacatatactggacgtgggaacagctacattcgttgctac
tacttcgctgtgaagactctgatcacaattggggggctgcctcatccagtgacattgttc
gaaatcactttccagcttctgaactacttcagtggggtctttgctttctctataatgata
gggcagatgagggatgtggttggggctgcaactgctggaaaaacatactacagagcatac
atggacggaaccattaagtatatgagcaattataaaatctccaaggatgttcagaatcgc
attaagacctggtatgaatacacatggaaatcccaggggatgctggatgagcaagaatta
ctggtgcaactgccagacaagatgagactagacattgcagtggatgtcagttacagcatc
gtcagcaaggtgccactctttcagggatgtgaccttcaaatgatttatgacatgctgaag
aggctaaggtcggtggtatatctgccaggagattatgtctgcaagaagggtgagattgga
agagcgatgtatatcatcaaggatggagaagtgcaagtattgggtggtccagatggaaag
acggttttggtaacactgcgagctggatctgtctttggggaaatcagcctgctttctgtt
ggaggtggtaacagaagaacagcaaatgtggtggcccatggatttgctaacctcttcatc
ttagacaagaaagatttaaacgatatcctaatccactatccagagtcacagaagctgctg
cggaagaaagccaaaaaaatgctcaacaaaaaccagaaaactaaagaggcggcagaaaag
gcaaaacatgtgattcgtcctagagctgaaacccccaaacttctccaagtggctgtagca
gctagtaagcagtctggaattgaaggatccctcacaagaatccagccacgactgcagaag
tccagctccttagagccgtccacttccctaaagcaaacaccttctccacaaggaatggca
gaagatgacaaccaggatgcagtatctgtgtcctcagacagctccacgttaaattctacc
agagggaaaaacctgtctgtagaagtgtctgcagaggaaaaagagacatccaaaaaataa
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