Polypterus senegalus (gray bichir): 120539166
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Entry
120539166 CDS
T08668
Symbol
phf1
Name
(RefSeq) PHD finger protein 1 isoform X1
KO
K11467
PHD finger protein 1
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
120539166 (phf1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
psex03000
]
120539166 (phf1)
03036 Chromosome and associated proteins [BR:
psex03036
]
120539166 (phf1)
Transcription factors [BR:
psex03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
120539166 (phf1)
Chromosome and associated proteins [BR:
psex03036
]
Eukaryotic type
Histone modification proteins
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
120539166 (phf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tudor_2
PHD
Mtf2_C
PHD_ash2p_like
ASH2L-like_WH
Chromo
Motif
Other DBs
NCBI-GeneID:
120539166
NCBI-ProteinID:
XP_039624912
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All DBs
Position
11:70212656..70253816
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AA seq
542 aa
AA seq
DB search
MEGQATSGGQSLKVAQGHGGQQFAEGDDVLARWSDGLLYLGNIKRVDKAKESCLIRFEDN
SEFWVLWKDTHSSVSPGMEGVCCVCKGQESIPRDRIISCHKCRHGYHQQCHVPRIEGDLD
VTPWTCRQCVFAVATKRGGARKKGRFARLMQAMKLLLPYQLSDLDWDPQHLTNQQQCYCY
CAGPGEWNLKMLQCWTCGQWFHEACTQCLTKPLLYGDRFYQFECSVCTRGPETIRRLPMN
WVDVSHLVLYHLSLCCKKKYFDFEREILSFINENWDSLMLGSLSDTPKSERGENILTALN
SHRDRFVSGKEIKKKKCLFGLHLRAPPPLTSDLTPVTPDLPSVMPQGGGSSQSRRSPLAE
RALGQRREKKPEPESRSLELRTRKAKRAFSRAVTQDLVPNPVSPNQLYQGYVGSSSTYNF
RRPEERWAQGSPPKRMFASFHPSASTVSQFSSPPASAQYQYSEEDSTYQPSQVFMDLTDQ
KQDPSQVQNVSSCSCTYVPNSSVGFTSQGANLTREAVRILARRVTVDGTVQYLVEWGNVN
MF
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atggaaggccaggccacctcaggaggtcagagtttgaaggttgcccaaggtcacggtggt
cagcagttcgcagagggagatgatgtgctggcaaggtggagtgatggcctgctgtacctt
ggcaatattaagagggttgacaaagcgaaggaatcttgcttaattcgctttgaagataac
tcagaattttgggtcctctggaaagacacacactcttctgtaagccctgggatggaaggt
gtgtgttgtgtttgtaaaggacaggagtcaattccaagggacagaattatcagctgccat
aagtgccggcatggttaccaccagcagtgccatgtgccacggatagaaggagacctagat
gttactccctggacctgtaggcagtgtgtgtttgctgttgccaccaagagagggggtgcc
agaaagaaaggccgctttgccaggctcatgcaggccatgaaattgcttttgccgtatcaa
ctgtcagatttggactgggaccctcagcacctgacaaatcagcagcaatgttattgctac
tgtgctggacctggggagtggaatctgaaaatgttacagtgttggacgtgtgggcagtgg
tttcatgaagcatgtacccagtgtctgactaaaccactgctgtatggggacaggttctac
cagtttgagtgctctgtctgcacaagggggcctgagactattaggagactcccaatgaac
tgggtagatgtgtcacaccttgtcttgtaccacctaagtctgtgctgcaagaagaaatac
tttgattttgagcgtgagattttgtccttcatcaacgagaactgggattcactgatgctg
ggatcgttgtcagacacacccaaatcagagcgaggtgagaatatcctcactgccttgaac
tcacacagagacagatttgtttctggtaaagaaattaaaaagaagaaatgtctatttggg
ctacatctacgggcaccaccccctttaacctctgacctgacacctgtgacacctgatcta
ccttctgtgatgccacaggggggaggttcatcccagtccagaagaagccctctggctgaa
cgagccttaggtcaacgtcgagaaaagaagccagaaccagaatcccgaagtctggagctc
cggacacgaaaagccaagcgagcattcagtcgtgcagtgacgcaggatttagttccgaat
ccagtgagccccaatcagctttatcaagggtatgtggggagttccagcacctataatttc
agacggccagaggagcgatgggcacagggttcacccccaaagagaatgtttgcttccttc
cacccttctgccagtactgtctctcagttcagttcacctcctgcaagtgcccagtatcaa
tacagtgaggaggacagcacataccagccttctcaggtgtttatggatttaaccgaccag
aagcaggacccatcccaagttcagaatgtcagttcctgttcctgtacatatgtccctaat
tcttcagttggcttcacaagtcaaggagcaaatctgacgagagaagctgtccgaattcta
gcccggagagtaacagttgatggcactgttcagtacttggtggagtggggaaatgtcaac
atgttctga
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