Polypterus senegalus (gray bichir): 120539338
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Entry
120539338 CDS
T08668
Name
(RefSeq) sodium/calcium exchanger 1-like
KO
K05849
solute carrier family 8 (sodium/calcium exchanger)
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04020
Calcium signaling pathway
psex04260
Cardiac muscle contraction
psex04261
Adrenergic signaling in cardiomyocytes
psex04371
Apelin signaling pathway
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
120539338
04020 Calcium signaling pathway
120539338
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
120539338
04261 Adrenergic signaling in cardiomyocytes
120539338
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psex02000
]
120539338
00536 Glycosaminoglycan binding proteins [BR:
psex00536
]
120539338
Transporters [BR:
psex02000
]
Solute carrier family (SLC)
SLC8: Na+/Ca2+ exchanger
120539338
Glycosaminoglycan binding proteins [BR:
psex00536
]
Heparan sulfate / Heparin
Others
120539338
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Calx-beta
Na_Ca_ex_C
Na_Ca_ex
DUF4843
Motif
Other DBs
NCBI-GeneID:
120539338
NCBI-ProteinID:
XP_039625259
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Position
11:complement(96947239..97542576)
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AA seq
922 aa
AA seq
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MITTTRHVWPTLGFRCLVLVATLIFHIQLSNASETEMPPDKSAVNGTCSGSNGCAEGVVL
PVWNPQDPSVGDKVARAIVYFVALIYMFLGMSIIADRFMSSIEVITSQEKEITIKKPNGE
TTTTTVRIWNETVSNLTLMALGSSAPEILLSVIEVCGHQFQAGDMGPSTIVGSAAFNMFV
IIALCVYVVPDGETRKIKHLRVFFVTAAWSIFAYIWLYLILSVFSPGVVDVWEAVLTFMF
FPLCVIQAWIADRRLLFYKYVHKRYRADKHRGIIIETEGDGPFTKMDIEMDGQVVNSHKE
VLDGMLSLADDNNKIQEEEARRDMARTLKELKQKHPDKDMEQLIEMANYHVLVQQQKSRA
FYRIQATRMMIGAGNILKKHAADQARKVISCHEARSEEDDQTIKILFEPSHYQCFENCGS
LVLTVVRRGGDPNCTVKVDFKTEDGTANAGSDYEFAEGTLVFKAGETHKEVTVGIIDDDI
FEEDEYFYVNLSNVRVTYAEGGLESSDSPPKASLGTDHTATVTIFDDDHAGIFTFESNST
RVSESIGIMQVKVQRTSGARGTVIVPYKTIEGTAKAGEDYEEVAGKLEFQNDETMKVIEV
KIIDDEEYEKNKTFTIELGEPVLVDIGQKHGDSNENKPVATEGENEQVAKMGCPSLGEHT
RMEVVIEESYEFKSTVDKLIKKTNLALVVGSSSWREQFVSAVTVSAGDDDEEESGEERLP
SCFDYIMHFLTVFWKVLFAFVPPTEYWNGWACFIVSIILIGILTAVTGDLASHFGCTVGL
KDSVTAVVFVALGTSVPDTFASKVAAIQDQYADASIGNVTGSNAVNVFLGIGVAWTIAAV
YWKSKGVVFKVNPGNLAFSVTLFTIFAFINVAVLIYRRRPSIGGELGGPRTAKILTTLLF
IFLWLMYILLASLEAYCHVQGF
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgataacaactactcgtcacgtctggcccaccttgggtttcaggtgcctagttctcgtt
gctacattaatcttccacatccagctatcaaatgcaagtgaaactgaaatgccacctgat
aagtctgctgtcaatggtacctgctcaggaagtaatggatgtgccgagggagtggttctt
cctgtctggaacccccaagatccctcagttggagacaaagttgccagagcaattgtatac
tttgtagccctgatttatatgtttctgggaatgtccatcatcgcagatcgcttcatgtca
tccatagaggtaatcacttcccaggagaaggagatcactattaaaaagccaaatggtgaa
actacaacaacaacagttagaatctggaatgagactgtgtccaatctgactctcatggca
ctgggatcatctgctccagagatcttactttctgtgattgaggtatgcggacatcagttt
caggcaggggatatgggccctagcaccattgttggtagcgcggctttcaacatgtttgtg
attattgccctttgcgtctatgtagtcccggatggggaaacaaggaagatcaagcacttg
agggtctttttcgtcacagcagcttggagcatctttgcctatatttggctctaccttatt
ctgtctgtgttctctcctggagttgtggacgtgtgggaggcagtcctaactttcatgttt
tttccactttgtgtcatccaagcttggattgctgaccgtaggctgcttttctataaatat
gtccacaaaaggtatagggcagataagcacaggggtataataattgagaccgaaggggat
ggtccttttaccaaaatggatattgaaatggatggccaagtagtcaattcacataaggaa
gtcctagatggaatgctaagcctggcagatgataacaataagattcaagaggaagaagct
cgtagggatatggccagaacattaaaagagctcaagcagaaacatccagacaaagacatg
gaacaactgattgaaatggccaattatcacgttcttgtccagcagcagaaaagccgagct
ttttataggattcaagctacccgaatgatgattggtgctgggaatatcctgaagaagcat
gctgcagaccaagctcggaaggtgatcagctgccatgaagctcgctcagaggaggatgac
caaaccatcaaaatcttatttgagccatctcactaccaatgcttcgagaactgtggctct
ctggtgcttacagtggtgagaagaggtggagatcccaactgcactgtgaaagttgatttt
aaaactgaagatggcacagccaatgctggctctgattatgaatttgcagagggcacgctt
gtctttaaagctggtgagactcacaaagaagtaacagtaggcatcatagatgatgacata
tttgaagaagatgaatatttttatgtcaacctgagtaatgtcagggttacttatgcagaa
ggaggattggaatccagtgattcccctccaaaagctagccttggcactgaccacacagcc
acagtgaccatatttgatgatgaccatgcaggaatattcacatttgaaagtaacagcact
cgtgtgagcgaaagtattgggattatgcaggtgaaagtccagcggacctctggagctcga
gggactgttattgtaccatacaagacaattgaaggtacagccaaagccggtgaagattat
gaagaggtagctggaaagctggagttccagaatgatgaaacaatgaaagtcatcgaggtg
aagatcattgatgatgaggagtatgaaaagaacaaaacatttacaattgaactgggagag
cctgtgctagtggacattggccagaagcatggtgattcaaatgagaataagccagtagct
acagagggggagaatgagcaggttgcaaaaatgggctgtccaagtcttggggagcacacc
cgaatggaggttgtcattgaggagtcctatgaatttaagagtaccgttgacaagcttatc
aagaaaactaaccttgctcttgtggtgggcagtagtagctggagagagcagtttgtgagt
gctgtcacagtcagtgcaggtgatgatgatgaagaagagagtggagaagaaagacttccg
tcctgctttgactacattatgcacttcttgacagtgttctggaaagttctatttgccttt
gtgccacccactgagtactggaatggttgggcctgtttcattgtgtccattatcttgatt
ggcattttaacagcagtcactggagacctggcctcccactttggctgcacagtgggtctc
aaggactctgttactgctgtggtttttgtggctctcggcacctctgtcccagatacgttc
gccagcaaagtcgctgctatccaagaccagtatgcagatgcttctattggaaatgtaaca
ggtagcaatgctgtcaatgttttcctggggattggagtagcctggacaatagcagcagta
tattggaaaagcaaaggtgttgttttcaaggttaaccctggaaacctggcattctctgtc
actctgtttaccatcttcgcctttattaatgtagctgttctcatctaccgacgaaggcca
tccattgggggggagttagggggacctcggactgcaaaaatcctcaccactctacttttc
atctttctctggcttatgtacatccttctggcttcccttgaggcatattgccacgtacaa
ggattctga
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