Polypterus senegalus (gray bichir): 120540384
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Entry
120540384 CDS
T08668
Symbol
slc6a11b
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
psex
Polypterus senegalus (gray bichir)
Pathway
psex04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
psex00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
120540384 (slc6a11b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psex02000
]
120540384 (slc6a11b)
Transporters [BR:
psex02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
120540384 (slc6a11b)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
120540384
NCBI-ProteinID:
XP_039627033
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Position
12:37872789..37890141
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AA seq
617 aa
AA seq
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MTAEKSIPVINGKAEDDMDPEALGATSLRSNDKKVNERGQWNNKVEFVLSVAGEIIGLGN
VWRFPYLCYKNGGGAFLIPYVIFFICCGIPVFFLETALGQFTSEGGITCWRKVCPLFEGI
GYATQVIEAHLNVYYVIILAWAIFYLFNCFSKELPWATCGHEWNTENCQEFDKVNASNCS
FANATSPVIEFWERRVLGISSGIEHIGNLRWELALCLLLAWTVCYFCIWKGIRSTGKVVY
VTATFPYVMLVILLIRGVTLPGAAEGIKFYLYPDISRLSDPQVWVDAGTQIFFSYAICLG
CLTALGSYNSYNNNCYRDCIMLCCLNSGTSFVAGFAIFSVLGFMASEQNVPIAAVAESGP
GLAFIAYPKAVTMMPVPPVWAALFFMMLIFLGLDSQFVCVESLVTAVVDMYPKIFRRGHR
RELLILALSIFSYLLGLIMLTEGGMYVFQLFDAYASSGMCLLFVAVFESICIGWVYGSDK
FYDNIEDMIGYRPIPLIKWCWMFLTPGICASIFLFFLIKYKPLKYNNIYVYPDWGYGIGW
MMALSSMICIPLGLVVQIWRTEGTFSERLKKLTTPCAELKMRGKLSRSTCLYAVNDCDTK
MKGDGTIATITEKETHF
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgacagctgaaaagagcatcccggtaatcaatgggaaggcagaagatgacatggatccc
gaggcgctcggcgcgacttctctgcgcagcaacgacaagaaagtgaatgagaggggccag
tggaacaacaaggtggagtttgtcttatccgtggctggcgagataatcggtctgggcaac
gtctggaggttcccgtacctgtgctacaagaacggcgggggtgctttcctcattccctat
gtcatattctttatttgctgtggaattcctgtatttttcctggagacggctttgggacag
ttcaccagtgagggtggcattacatgctggagaaaagtatgcccactctttgaaggaatt
ggatatgctacacaagtcattgaggcgcacctaaacgtctattatgtgatcattctggct
tgggcaatcttttacctttttaattgcttctcaaaggaactgccttgggcaacatgtggt
cacgaatggaatacagaaaactgtcaagaatttgacaaagtgaatgccagcaactgcagt
tttgctaatgcaacctctccagtgattgagttctgggagcgcagagtacttggcatctcc
agtggaattgagcacattggaaacttacgatgggagctggcgctctgcctcctcttggct
tggacagtgtgctatttttgcatctggaagggcatacggtctacgggaaaggtagtgtat
gtgacagccacatttccttatgtgatgctggtgatcctgttgattcgaggagtgaccttg
cctggtgcagcagaaggaataaagttctacttatatccagatatttctcgactctcagac
cctcaggtgtgggtggatgcaggcacacaaatcttcttctcttatgccatttgccttggc
tgtctgacggctttgggcagttacaacagttataacaacaactgctacagggactgcatc
atgctgtgctgtctgaacagtggcaccagctttgtggctggttttgccattttctccgtc
ttaggttttatggcatctgagcaaaatgttcccattgcagctgtggctgagtcaggtcct
ggtctagcattcattgcctaccccaaagcggtgaccatgatgccagtgccacccgtttgg
gcagctctttttttcatgatgctgatcttccttgggctggacagtcagtttgtttgtgtt
gagagtttggtcacagcagtggtggacatgtatcccaaaattttccgaagaggtcacaga
agggagctactcatcctggctttgtccatcttctcatatcttctgggacttatcatgcta
actgagggtgggatgtatgtctttcagttgtttgatgcctatgcctcaagtggaatgtgt
ctgctgtttgttgcagtttttgaatcaatttgcataggatgggtttatggtagtgataaa
ttctatgacaacattgaagacatgattggctatcggcccatccccttaatcaagtggtgc
tggatgttcctgacaccagggatctgtgctagcatcttccttttcttcttgataaaatac
aagccactgaaatacaataacatctatgtctacccagactggggttatggcattggctgg
atgatggcgctgtcctccatgatttgcatccctcttggactagtagttcaaatttggcga
acagaagggacattttctgagaggttgaaaaagctgaccaccccatgtgctgagctgaag
atgaggggcaagctgagtcgcagcacatgtctctatgccgtcaacgattgtgataccaaa
atgaagggcgatggaacaattgcaactatcacagaaaaagaaacccacttttag
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