Pseudomonas shahriarae: HU773_014340
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Entry
HU773_014340 CDS
T07642
Name
(GenBank) efflux transporter outer membrane subunit
KO
K18139
outer membrane protein, multidrug efflux system
Organism
pshh
Pseudomonas shahriarae
Pathway
pshh01501
beta-Lactam resistance
pshh02024
Quorum sensing
Module
pshh_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HU773_014340
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HU773_014340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pshh02000
]
HU773_014340
01504 Antimicrobial resistance genes [BR:
pshh01504
]
HU773_014340
Transporters [BR:
pshh02000
]
Other transporters
Pores ion channels [TC:
1
]
HU773_014340
Antimicrobial resistance genes [BR:
pshh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
HU773_014340
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
HU773_014340
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
HU773_014340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
QXH86884
LinkDB
All DBs
Position
complement(3227528..3228979)
Genome browser
AA seq
483 aa
AA seq
DB search
MTESIVFRAPALTVMFCAVFLSACAIGPDYQRPQVAEPAQYKEAQGWRQAAPSDALARGA
WWELYGDQQLNSLVDKLNNANQTVAQAEARYRQAQATARSSRGAFFPTVDLSAGKTRASQ
GTGSSNASLSSSSSGIRDTLNTQLGVSWEADIWGKLRRGLEASDASAQASAADLAAMRLS
QQSELVQNYLQLRVMDEQTRLLQTTVETYQRSLQMTQNQYRAGVSGKDAVAQAQTQLKST
QASLIDLVWQRAQLENAIAVLIGEPPAMFNLAVSKDIPALPQIPANLPSQLLERRPDIAS
AERAVIAANANIGVAKTAYYPDLTLSLAGGYSSSTYADWISLPNRFWSVGPKLAMTLFDG
GQRSAEVDRAEASYDETVAKYRQTVLDGFREVENYMVQLKVLEDEAGVSNEALESARESL
RLTQNQYKAGLIAYLDVVNVQATALSNERTVLTLLQTRLVASVQLIAALGGGWDGQLEPN
EKP
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaatcaattgttttccgggcccctgcactgacggtgatgttttgcgccgtgttc
ctcagcgcctgcgccatcggccccgattaccagcgcccgcaagttgccgagccggcgcag
tacaaagaagcccagggctggcgccaggccgcccccagcgatgccctggcccgtggcgcc
tggtgggagctgtatggcgaccagcaactcaacagcctggtggacaagctcaacaacgcc
aaccagaccgtggcccaggccgaagcccgctaccgccaggcccaggccacggcacgcagc
tcccgtggcgcgttctttccgaccgtcgacctgagcgccgggaaaacccgcgccagccag
ggcacgggtagcagtaatgcgagcttgagcagctccagcagtggtatccgcgacaccctc
aacacccagttgggggtgagctgggaagccgatatctggggcaaattacgccgaggcctg
gaagccagcgacgccagcgcccaagccagcgccgccgacctggcggccatgcgcctgagc
cagcagtcggaactggtgcagaactacctgcaattgcgggtcatggacgaacagacgcgc
ttgctgcaaaccaccgtcgagacctatcagcgctcgctgcaaatgacccagaaccagtac
cgcgccggtgtctcaggcaaggacgctgtcgcccaggcccagacccagctcaagagtacc
caggccagtctgatcgacctggtttggcaacgggcgcaactggaaaacgccatcgcggta
ttgatcggcgaacctcctgccatgttcaacctggcggtgagcaaggacataccggcactg
ccgcagattcctgccaacctgccatcgcaactgctggaacgccgcccggatattgcctcg
gcggagcgcgcagtgattgccgccaacgccaatatcggcgtggcgaaaaccgcctactac
cccgacctgaccctgagtctggccggtggttactccagcagcacctatgccgactggatc
agcctgcccaaccgcttctggtcggtggggccgaaactggcgatgaccctgttcgacggc
gggcagcgctcggcagaagttgaccgcgccgaagcgtcctacgacgaaaccgtggccaag
taccgccagaccgtactcgacggtttccgcgaggtggaaaactacatggtccagctcaag
gttctggaagacgaggcgggcgtgagcaacgaggccctggagtccgcgcgggaatctctg
cgcctgacccagaaccagtacaaggccggcctgattgcctacctggatgtggtcaacgtc
caggcgacggcgttgagcaacgaacgtaccgtgctgaccttgctgcaaacccggctggtg
gccagcgtgcaactgattgcagcgctgggtggtggttgggatggccagttggagccaaac
gaaaaaccctga
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