Pseudomonas shahriarae: HU773_016600
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Entry
HU773_016600 CDS
T07642
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
pshh
Pseudomonas shahriarae
Pathway
pshh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pshh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HU773_016600 (xthA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pshh03400
]
HU773_016600 (xthA)
Enzymes [BR:
pshh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
HU773_016600 (xthA)
DNA repair and recombination proteins [BR:
pshh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HU773_016600 (xthA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QXH87308
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Position
3760952..3761764
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AA seq
270 aa
AA seq
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MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVHDEQFPLAEVQALGYHVYYHGQK
GHYGVALLSRQEPLALHKGFASDEEDAQRRFIWGTFADEHGNPITIMNGYFPQGESRDHP
TKFPAKQRFYEDLQHLLESQFSNDQALVVMGDVNISPEDCDIGIGADNAKRWLKTGKCSF
LPEEREWMARLKNWGLTDSFRHLNPDVADRFSWFDYRSRGFEDEPKRGLRIDLIMASNGL
LPRVKDAGVDYELRGLEKPSDHAPIWLELS
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcgtctcttttaatatcaacgggctgcgcgcccggcctcatcagctggcggcc
ctgatcgacaaacatcaacccgacgtgatcggcctgcaggaaaccaaagtccacgacgag
cagttcccgctggccgaagtccaggccctgggctatcacgtgtactaccacgggcagaaa
ggccactacggcgtcgccctgctctcgcgccaggaaccgctggccctgcacaagggtttt
gccagcgacgaagaggatgcccagcgccgctttatctggggcaccttcgccgatgaacac
ggcaacccgatcaccatcatgaatggctatttcccacagggcgaaagccgcgaccacccg
accaagttcccggccaagcagcgcttttacgaagatctgcagcacctgctggagagccag
ttcagcaatgaccaggcattggtggtgatgggcgacgtgaatatttcccccgaggattgc
gacatcggcatcggtgccgacaatgccaagcgctggctgaagaccggcaaatgcagcttc
ctgccggaagaacgcgagtggatggcgcgcctgaagaactggggcctgaccgacagcttc
cgtcacctcaacccggacgtggcggatcgcttcagctggttcgattaccgcagccgcggc
tttgaagacgaacccaagcgtggcctgcggatcgacctgatcatggcctccaacggcctg
ttgccacgagtcaaggatgcgggtgtggactatgagttgcgcggcctggaaaaaccctcg
gaccatgcgccgatctggctggaactgagctga
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