KEGG   Pseudomonas shahriarae: HU773_016600
Entry
HU773_016600      CDS       T07642                                 
Symbol
xthA
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
pshh  Pseudomonas shahriarae
Pathway
pshh03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pshh00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    HU773_016600 (xthA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pshh03400]
    HU773_016600 (xthA)
Enzymes [BR:pshh01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     HU773_016600 (xthA)
DNA repair and recombination proteins [BR:pshh03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     HU773_016600 (xthA)
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: QXH87308
LinkDB
Position
3760952..3761764
AA seq 270 aa
MKIVSFNINGLRARPHQLAALIDKHQPDVIGLQETKVHDEQFPLAEVQALGYHVYYHGQK
GHYGVALLSRQEPLALHKGFASDEEDAQRRFIWGTFADEHGNPITIMNGYFPQGESRDHP
TKFPAKQRFYEDLQHLLESQFSNDQALVVMGDVNISPEDCDIGIGADNAKRWLKTGKCSF
LPEEREWMARLKNWGLTDSFRHLNPDVADRFSWFDYRSRGFEDEPKRGLRIDLIMASNGL
LPRVKDAGVDYELRGLEKPSDHAPIWLELS
NT seq 813 nt   +upstreamnt  +downstreamnt
atgaaaatcgtctcttttaatatcaacgggctgcgcgcccggcctcatcagctggcggcc
ctgatcgacaaacatcaacccgacgtgatcggcctgcaggaaaccaaagtccacgacgag
cagttcccgctggccgaagtccaggccctgggctatcacgtgtactaccacgggcagaaa
ggccactacggcgtcgccctgctctcgcgccaggaaccgctggccctgcacaagggtttt
gccagcgacgaagaggatgcccagcgccgctttatctggggcaccttcgccgatgaacac
ggcaacccgatcaccatcatgaatggctatttcccacagggcgaaagccgcgaccacccg
accaagttcccggccaagcagcgcttttacgaagatctgcagcacctgctggagagccag
ttcagcaatgaccaggcattggtggtgatgggcgacgtgaatatttcccccgaggattgc
gacatcggcatcggtgccgacaatgccaagcgctggctgaagaccggcaaatgcagcttc
ctgccggaagaacgcgagtggatggcgcgcctgaagaactggggcctgaccgacagcttc
cgtcacctcaacccggacgtggcggatcgcttcagctggttcgattaccgcagccgcggc
tttgaagacgaacccaagcgtggcctgcggatcgacctgatcatggcctccaacggcctg
ttgccacgagtcaaggatgcgggtgtggactatgagttgcgcggcctggaaaaaccctcg
gaccatgcgccgatctggctggaactgagctga

DBGET integrated database retrieval system