Pseudorhodoplanes sinuspersici: CAK95_23240
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Entry
CAK95_23240 CDS
T04834
Name
(GenBank) RNA chaperone Hfq
KO
K03666
host factor-I protein
Organism
psin
Pseudorhodoplanes sinuspersici
Pathway
psin02024
Quorum sensing
psin03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psin00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CAK95_23240
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CAK95_23240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psin03019
]
CAK95_23240
03036 Chromosome and associated proteins [BR:
psin03036
]
CAK95_23240
Messenger RNA biogenesis [BR:
psin03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
CAK95_23240
Chromosome and associated proteins [BR:
psin03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
CAK95_23240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
AcMNPV_AC11
Motif
Other DBs
NCBI-ProteinID:
ARQ03143
UniProt:
A0A1W7A0M5
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All DBs
Position
4781219..4781476
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AA seq
85 aa
AA seq
DB search
MAAERTQNLQDTFLNHVRKAKIPLTIFLVNGVKLQGVVTWFDNFCVLLRRDGHSQLVYKH
AISTIMPGHPVQLFEGAEEGAGEKG
NT seq
258 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgaacgaactcaaaatctccaggacaccttcctcaaccacgtccgcaaggcc
aaaattccgctcacgatatttttggtgaacggcgtgaagctgcagggcgttgtcacatgg
ttcgacaacttttgtgtgttgctgcgacgggatgggcattcgcagcttgtctacaaacac
gccatctccaccatcatgccgggccatccggtccagcttttcgagggtgcggaagagggc
gcaggagaaaaaggctag
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