KEGG   Pseudorhodoplanes sinuspersici: CAK95_23240
Entry
CAK95_23240       CDS       T04834                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
psin  Pseudorhodoplanes sinuspersici
Pathway
psin02024  Quorum sensing
psin03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:psin00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    CAK95_23240
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    CAK95_23240
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:psin03019]
    CAK95_23240
   03036 Chromosome and associated proteins [BR:psin03036]
    CAK95_23240
Messenger RNA biogenesis [BR:psin03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     CAK95_23240
Chromosome and associated proteins [BR:psin03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    CAK95_23240
SSDB
Motif
Pfam: Hfq Hfq_1 AcMNPV_AC11
Other DBs
NCBI-ProteinID: ARQ03143
UniProt: A0A1W7A0M5
LinkDB
Position
4781219..4781476
AA seq 85 aa
MAAERTQNLQDTFLNHVRKAKIPLTIFLVNGVKLQGVVTWFDNFCVLLRRDGHSQLVYKH
AISTIMPGHPVQLFEGAEEGAGEKG
NT seq 258 nt   +upstreamnt  +downstreamnt
atggcagccgaacgaactcaaaatctccaggacaccttcctcaaccacgtccgcaaggcc
aaaattccgctcacgatatttttggtgaacggcgtgaagctgcagggcgttgtcacatgg
ttcgacaacttttgtgtgttgctgcgacgggatgggcattcgcagcttgtctacaaacac
gccatctccaccatcatgccgggccatccggtccagcttttcgagggtgcggaagagggc
gcaggagaaaaaggctag

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