Pediococcus siamensis: ACLJJ6_06825
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Entry
ACLJJ6_06825 CDS
T11433
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
psis Pediococcus siamensis
Pathway
psis03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psis00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACLJJ6_06825
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psis03021
]
ACLJJ6_06825
03400 DNA repair and recombination proteins [BR:
psis03400
]
ACLJJ6_06825
Enzymes [BR:
psis01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACLJJ6_06825
Transcription machinery [BR:
psis03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACLJJ6_06825
DNA repair and recombination proteins [BR:
psis03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACLJJ6_06825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XNN30794
LinkDB
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Position
complement(1397675..1401286)
Genome browser
AA seq
1203 aa
AA seq
DB search
MAGHLVKYGKHRTRRSYARIKEVLELPNLIEIQSNSYQWFLDEGLKDMFDDIMPIDDFAG
NLSLEYVDYQLLEPKYTVDEAREHEANYSAPLHVTLRLTNHETGEIKSQDVFFGDFPLMT
EQGTFIINGAERVIVSQLVRSPGVYYTKEADKNGRDIWGTTVIPNRGAWLEYETDAKNIA
YVRIDRTRKIPMTELVRALGFGSDEEIVDMLGQTDSLDNTLDKDVHKNSDDSRVEESLKD
IYERLRPGEPKTADSSRSLLTARFFDPKRYDMAPVGRYKVNKKLSLKTRLLGQTLAETLA
DPDTGEVIAQKGTVVSKDVMKDLAPYLDNKDFKAITYTPSDEAVVTEPMTVQAIKIVNPN
DPERELTMIGNDNIDLKLKHITPADIIASINYFFLLQEGIGSTDDIDHLGNRRIRSVGEL
LQNQFRIGLSRMERVVRERMSIQDAATVTPQQLINIRPVVASIKEFFGSSQLSQFMDQTN
PLGELTHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINSLASYA
KINKYGFIETPYRRVSWTTHKVTDKIDYLTADEEDQYVIAQANSPLNDDGSFVDDVVMAR
HESDNIETNITNVDYMDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLLDPHA
PLVGTGIEYKAAHDSGVALICKHEGTVEYVDAREIRVRRDDGALDTYKLMKFRRSNGGKN
YNQRPIVKVNDHVDNDEVLADGPSMEGGELALGQNPLVAFMTWQGYNFEDAIAINERLVR
DDVYTSIHIEEYESEARDTKLGPEEMTREIPNVGEDALKDLDEDGIVRVGAEVEDGDILV
GKVTPKGVTELSAEERLLHAIFGEKAREVRDTSLRVPHGGGGIIQDVKIFTRENGDELSP
GVNMMVRVYIAQKRKLQVGDKMAGRHGNKGTVSVVIPEEDMPYMPDGTPIDIMLSPMGVP
SRMNIGQVLELHLGMAARNLGIHVATPVFDGARDKDIWDAVHEAGMQSDAKTVLYDGRTG
EPFEQRIAVGVMHYMKLAHMVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWAL
EAYGAAYTLQEILTYKSDDVVGRVKTYEAIVKGDPIPRPGVPESFRVLVKELQALGLDMK
VLDDDKNEIELRDMDDDDDDVVNVDALSKYAEEQKDKSKEETTTSNETSSVSETKAETEN
NQK
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggacatttggtaaaatacggtaaacaccgaacccgtagaagttacgcacggatt
aaagaagtgctggaacttcctaacttaattgagattcaaagtaattcataccaatggttc
cttgatgaagggttaaaggatatgttcgatgacattatgccaatcgacgactttgccggc
aatctttccttggaatatgtggattatcaattgcttgaaccaaagtatacggtagacgaa
gcacgtgaacatgaggctaattattcggcgccattgcacgttaccttacgtttaacgaac
catgagactggtgaaattaagtctcaagatgttttctttggtgattttccattaatgaca
gaacaaggtactttcattattaatggggcagaacgggttattgtttcccagttagttcgt
tcacctggtgtttattacacaaaggaagccgataaaaatggacgcgacatttggggtaca
acggtcatccctaatcgtggtgcctggctagaatatgaaactgatgccaagaatattgct
tacgtgcgaattgaccgaacacgtaagattccaatgactgagttggtccgtgcccttggg
tttggctctgatgaagaaattgtggatatgttaggccagaccgatagtctggataacact
ttggacaaagacgtgcacaaaaattctgatgattcccgtgtcgaggaatctttgaaggat
atttatgaacgtttgcgcccaggcgaacctaagactgctgacagttcacgtagtttgttg
acggcacgattctttgatcctaaacgttatgacatggcgcctgttggtcgttataaagtg
aataagaagttaagcctcaagacccgtttattaggtcaaactttagctgaaactttagct
gatcctgatactggtgaagtaatcgcacaaaagggcaccgtggtttctaaagatgtgatg
aaagacttagccccttatttggacaacaaggatttcaaagcaatcacttatacgccttct
gatgaagccgttgtgacagaaccaatgaccgtgcaagccatcaagattgtgaaccctaac
gatcctgaacgcgagttaacgatgattgggaatgataatattgatttgaaactcaaacat
attactccagctgatattatcgcttcaattaactatttcttcttattacaagaaggaatt
gggtccactgatgatattgaccatttgggtaaccgtcgaattcgctcagtgggtgaattg
ctccaaaaccaattccgtattggattatcacgaatggaacgtgtagttcgtgaacgaatg
tcaattcaggatgccgctacggttacaccgcaacagttgattaatattcgtccggttgtg
gcctcaatcaaagaattctttggttcttctcagttatcccagttcatggaccagacaaac
ccgcttggtgaactgacacacaagcgtcgtttatctgccttaggacctggtggtttgaca
cgtgaccgtgccggatatgaagtgcgtgatgtgcactatacgcattatggccggatgtgt
ccgattgaaacgcctgaaggaccaaatatcgggttgattaacagtttggctagttacgct
aaaattaacaagtatggttttattgaaaccccttatcgtcgtgtttcttggacaacccat
aaggttaccgataagatcgattacttgacggctgacgaagaagaccaatatgtcattgct
caggcaaactcaccattaaatgatgatggctcctttgtggatgatgtggttatggctcgt
catgaaagtgacaacattgaaactaacattaccaacgtcgattacatggacgtttcacca
aaacaagtagttgcagtcgcaacagcatgtattcctttcttggaaaatgatgattctaac
cgtgcgttgatgggagctaacatgcagcgtcaggctgtacctttgcttgatccacatgca
ccgcttgtcggaactgggatcgaatataaggctgcgcatgactctggtgtggcattgatt
tgtaaacatgaaggaactgtggaatacgttgatgcacgtgaaattcgtgttcgtcgtgat
gatggggccttagatacttacaaactgatgaaattccgtcgttctaacggtggtaagaac
tataaccaacgtccaatcgtcaaagtcaacgaccatgttgataacgatgaagtcttagct
gacggtccttcaatggagggcggcgagttggcattggggcaaaacccattagtagccttc
atgacttggcaaggttataacttcgaagatgcgattgcgattaatgaacgtttggttcgt
gatgatgtgtacacttcaattcatattgaagaatacgaatcggaagcacgagataccaaa
cttggacctgaagaaatgacccgcgaaattcctaacgttggtgaagatgctttgaaagat
cttgacgaagacggaattgtgcgtgtcggtgcggaagttgaagacggcgatatcttagtt
ggtaaggttacaccaaagggagtgactgagttatcagctgaagaacgtctattacacgct
atctttggtgaaaaagcacgcgaagttcgtgatacttcgttacgtgttcctcatggtggt
ggcggtattatccaggatgtgaagatcttcacacgtgaaaacggtgacgaactttcacct
ggtgtcaatatgatggtccgtgtttatattgcccaaaaacgaaaactgcaagttggtgac
aagatggccggtcgtcatgggaataaagggaccgtttcggtggttattcctgaagaagac
atgccatacatgccagatggtacgccaatcgacatcatgttgagtcctatgggtgtccct
tcacgtatgaatattggtcaagttttagaattacatcttgggatggcagcacgtaactta
ggtattcatgttgcaacaccagtttttgatggtgcgcgtgataaagatatttgggatgct
gttcacgaagctgggatgcagtctgatgcgaagacagttttgtatgatggtcgtactggt
gagccatttgaacaacggattgccgttggtgtcatgcactacatgaaattagcgcacatg
gttgatgacaagattcatgcacgttcaatcggaccttactccttagttacacaacaacca
ctgggtggtaaagctcagtttggtggtcagcgtttcggtgaaatggaagtttgggcactc
gaagcttatggggctgcttataccctacaagaaattttgacttacaagtcagatgatgtt
gtgggtcgagttaagacttatgaagcaattgttaagggtgatccaattcctcgtccagga
gttccagaatctttccgtgtgcttgttaaagaactgcaagccttgggactagatatgaag
gtcttggatgatgacaaaaacgagattgaattgcgagacatggacgatgacgatgatgat
gtcgtaaacgttgatgcactcagcaagtatgccgaagaacaaaaggacaagtcaaaggaa
gaaaccacaacttctaatgagacttcttctgtaagtgaaacaaaggctgaaacagaaaat
aaccaaaaataa
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