Pediococcus siamensis: ACLJJ6_07165
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Entry
ACLJJ6_07165 CDS
T11433
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psis Pediococcus siamensis
Pathway
psis03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psis00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACLJJ6_07165
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psis03400
]
ACLJJ6_07165
Enzymes [BR:
psis01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ACLJJ6_07165
DNA repair and recombination proteins [BR:
psis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACLJJ6_07165
Prokaryotic type
ACLJJ6_07165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
XNN30849
LinkDB
All DBs
Position
complement(1456859..1457581)
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AA seq
240 aa
AA seq
DB search
MKTFIHNDWQQVLGPKFEKAYYKDLHDFLKSEYKHYLIHPDMFHIFEAFEWTPFSQVKVV
ILGQDPYHEPNQAHGLSFSVLPGVKIPPSLQNIYKELQDDLGIKPVSHGYLEKWAKQGVL
MLNTVLTVRNGQAFSHKGKGWEQLTDAAIQKLSERETPVVFILWGKAAQEKIALIDTKRN
IIIKSAHPSPFSARYGFFGSHPFSKTNAALKALGEEPIDWQLPEHVEVAQANQHSSQQTR
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacgtttattcataatgattggcagcaagttttagggccgaaatttgaaaaggcc
tattacaaagatttgcatgattttttaaagtctgaatacaaacactatttaatccatccg
gatatgtttcatatttttgaagctttcgaatggacgccctttagccaggttaaagttgtc
attttgggacaggatccttatcatgaacccaatcaggcccatggcttaagcttttcggtt
ttgcccggcgttaaaattccgccgtcactgcaaaatatctataaagaactccaagatgat
ttaggcattaaacccgtttcgcacggttatttagaaaagtgggccaaacagggcgtgctg
atgttaaataccgttttaacggtccgcaacggccaggctttttcacataaaggcaaaggc
tgggaacagttgacggacgccgccattcaaaagctttctgaacgagaaacgccggtggtc
tttattttgtggggcaaagccgcccaagagaagatcgcgctgattgatacaaaacgcaat
attattattaaatcggctcacccaagtcctttttcagcccgatacggtttttttggttcc
catcctttttcaaaaacgaatgcggcgctaaaagcgcttggggaagaaccgattgattgg
cagctgccagagcatgtagaggttgcgcaagcaaatcaacattcttctcaacaaacgagg
taa
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