Phocoena sinus (vaquita): 116741880
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Entry
116741880 CDS
T07759
Symbol
RPA2
Name
(RefSeq) replication protein A 32 kDa subunit isoform X1
KO
K10739
replication factor A2
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03030
DNA replication
psiu03420
Nucleotide excision repair
psiu03430
Mismatch repair
psiu03440
Homologous recombination
psiu03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
116741880 (RPA2)
03420 Nucleotide excision repair
116741880 (RPA2)
03430 Mismatch repair
116741880 (RPA2)
03440 Homologous recombination
116741880 (RPA2)
03460 Fanconi anemia pathway
116741880 (RPA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psiu03032
]
116741880 (RPA2)
03400 DNA repair and recombination proteins [BR:
psiu03400
]
116741880 (RPA2)
DNA replication proteins [BR:
psiu03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
116741880 (RPA2)
DNA repair and recombination proteins [BR:
psiu03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
116741880 (RPA2)
MMR (mismatch excision repair)
116741880 (RPA2)
DSBR (double strand breaks repair)
HR (homologous recombination)
116741880 (RPA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
TFA2_Winged_2
Motif
Other DBs
NCBI-GeneID:
116741880
NCBI-ProteinID:
XP_032464946
Ensembl:
ENSPSNG00000005730
LinkDB
All DBs
Position
1:complement(21928126..21946947)
Genome browser
AA seq
270 aa
AA seq
DB search
MWTSGFESYSSSSFGGAGGYTQSPGGFGSPTPSQAEKKSRARAQHIVPCTISQLLSATLV
DEVFRIGNVEISQVTIVGIIRNAEKAATNIVYKIDDMTAAPMDVRQWVDTDDASSENTVV
PPETYVKVAGHLRSFQNKKSLVAFKIMPLEDMNEFTTHILEVVNAHMMLSKCNSQPSAGK
APVSNPGMGEAGNFGGNIFMPANGLTVAQNQVLNLIKACPRPEGLNFQDLKNQLQHMTVP
SIKQAVDFLSNEGHIYSTVDDDHFKSTDAE
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgtggaccagtggatttgaaagctatagcagttcctcttttgggggagccggaggctac
acacagtcccctgggggctttggatcaccgacaccttcccaggccgaaaagaaatctaga
gcccgagctcagcatattgtaccctgtaccatatctcagctgctttctgctactctggtt
gatgaagtgttcagaattggaaatgttgagatttcacaggtcactattgtggggataatc
agaaatgcagagaaggctgcaaccaacattgtttacaaaatagatgacatgacggctgca
cccatggatgttcgccagtgggttgacacagatgatgccagcagtgaaaacactgtggtt
cctccagaaacatatgtgaaagtggctggtcatctgagatcttttcagaacaagaaaagc
ctggtagcctttaagatcatgcccctggaggatatgaatgagttcaccacacatattctg
gaagtagtcaatgcacacatgatgctcagcaagtgtaacagccagccctcagcagggaaa
gcacctgtcagcaatccaggaatgggtgaagctgggaactttggtgggaatatcttcatg
ccagcaaatggcctcactgtggcccagaaccaggtactgaatttgattaaggcttgccca
aggcctgaaggattgaactttcaggatctcaagaatcagctccaacacatgaccgtaccc
tccatcaagcaagctgtggattttctaagcaacgagggacacatctattccactgtggat
gatgatcattttaaatccacagatgcagaataa
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