Phocoena sinus (vaquita): 116741927
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Entry
116741927 CDS
T07759
Symbol
NPFFR1
Name
(RefSeq) LOW QUALITY PROTEIN: neuropeptide FF receptor 1
KO
K04240
neuropeptide FF receptor 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116741927 (NPFFR1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
psiu04030
]
116741927 (NPFFR1)
G protein-coupled receptors [BR:
psiu04030
]
Rhodopsin family
Peptide
Neuropeptide FF
116741927 (NPFFR1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7tm_4
Cytochrome_CBB3
Motif
Other DBs
NCBI-GeneID:
116741927
NCBI-ProteinID:
XP_032464990
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Position
16:complement(22505695..22526983)
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AA seq
620 aa
AA seq
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MSRPGLQWSVGCPLLWRGAPSLRRESHLGGDPGRPGSDGRCGQGALRRQTCAGCHGDGAG
RAPSLWTGRAGSGQRAAGSRAWRVAALLGSLQPRPLPGRLRAARGARPRAGLGPASARPS
VRFRRALDQNRQAQRLGRAPAAQRRRPAVPCRLTGARCLPPSVTVPERAGVGSMEVSHLF
FAWGPDPCAPLLLGEPSQPSNSSRPPCQNGSDAETNTAANLTFSSYYQHSSLVAAVFIVA
YVLIFLLCMVGNTLVCFIVLKNRHMCTVTNMFILNLAVSDLLVGIFCMPTTLVDNLITGW
PFDNATCKMSGLVQGMSVSASVFTLVAIAVERFRCIVHPFREKLTLRKALVTIAVIWALA
LLIMCPSAVTLTVTREEHHFMVDARNRSYPLYSCWEAWPEKGMRRVYTAVLFSHIYLAPL
ALIVVMYARIARKLCKAPGPARAGEEAAGEGGRGARRRARVVHMLVMVALFFTLSWLPLW
ALLLLIDYGQLSEPQLHLVTVYAFPLAHWLAFFNSSANPIIYGYFNENFRRGFQAAFRAQ
LCPPPWGSHREAXPNGLLRTRVFVEVQPSDSGLTSESGSSRGAPRPGRLQLHSGHVAPPG
LAAEGPGFSHTPLTIPAWGV
NT seq
1863 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggccagggctgcagtggtcagtgggttgtcctctactttggaggggtgctccg
tccctgcggagggagtcacatctgggaggcgacccggggcgcccaggctcggacggacgc
tgcgggcagggggcgctgcgcaggcaaacgtgtgccgggtgccatggcgacggcgcgggg
cgagccccctccctctggacggggagggcgggcagcgggcaacgggcagcgggcagcaga
gcctggagggtagctgcgctgctcgggagccttcagccccggccgctgcccggccgcctc
cgggcggcaaggggagcgagaccccgcgcagggctggggcctgcgagcgcacgcccctcc
gtccgcttccgccgggccctggaccagaaccgccaagcgcagaggctggggcgcgcgcca
gcagcccagcgccggagacccgcggtcccctgcaggctcacaggggcccgctgcctccct
ccgtcggtgactgtcccagagcgggccggagtgggcagcatggaggtcagtcatctcttc
ttcgcctggggtcctgacccgtgtgctcctttgctcctaggggagccctcccagccttcc
aacagcagccggcccccatgccagaatgggagtgatgccgagaccaacactgctgcaaac
ctcaccttctcctcctactaccagcactcctccctggtggctgccgtgttcattgtggcc
tacgtgctcatcttcctcctctgcatggtgggcaacaccctggtctgcttcattgtgctc
aagaaccggcacatgtgcaccgtcaccaacatgtttatcctcaacctggccgtcagcgac
ctgctggtgggcattttctgcatgcccaccaccctcgtggacaacctcatcactgggtgg
cccttcgacaacgccacatgcaagatgagcggcttggtgcagggcatgtccgtgtcagct
tctgttttcacactggtggccattgccgtggaaaggttccgctgcatcgtgcaccctttc
cgcgagaagctgaccctgcggaaggcgctggtcaccattgcggtcatctgggccctggcc
ctgctcatcatgtgcccctcggccgtcacgctgaccgtcacgcgcgaggagcaccacttc
atggtggacgcccgcaaccgctcttacccactctactcgtgctgggaggcctggcccgag
aagggcatgcgcagggtctacacggccgtgctcttctcgcacatctacctggcgccgctg
gcgctgatcgtggtcatgtacgcgcgcatcgcccgcaagctgtgcaaggccccggggccc
gcgcgcgccggcgaggaggcggccggggagggcggccgcggcgcccggcgcagggcccgg
gtggtgcacatgctggtcatggtggcgctgttcttcacgctgtcctggctgcctctctgg
gccctgctgctgctcatcgactacgggcagctgagcgagccgcagctgcacctggtcacc
gtctacgccttccccttagcccactggctggccttcttcaacagcagcgccaaccccatc
atctacggctacttcaacgagaacttccgccgcggcttccaggccgccttccgcgcccag
ctctgcccgccgccgtgggggagccaccgggaggcgnntcccaacgggctcctgcgcacg
cgggtcttcgtggaggtgcagcccagcgactctggcctaacctccgagtcgggctcgagc
cgcggggcccccaggcccggccgcctccagctgcacagtggccacgtggccccccctggc
ttggccgccgagggtcccggcttttcccatacacccctcaccataccagcctggggcgtt
tga
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