Phocoena sinus (vaquita): 116742189
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Entry
116742189 CDS
T07759
Symbol
ARFGEF1
Name
(RefSeq) brefeldin A-inhibited guanine nucleotide-exchange protein 1
KO
K18442
brefeldin A-inhibited guanine nucleotide-exchange protein
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
116742189 (ARFGEF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
psiu04131
]
116742189 (ARFGEF1)
Membrane trafficking [BR:
psiu04131
]
Endosome - Golgi transport
Arf GTPases and associated proteins
Arf GTPase associated proteins
116742189 (ARFGEF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec7
BIG2_C
Sec7-like_HUS
DCB
Sec7-like_HDS
Motif
Other DBs
NCBI-GeneID:
116742189
NCBI-ProteinID:
XP_032465389
Ensembl:
ENSPSNG00000019032
UniProt:
A0A8C9CTW0
LinkDB
All DBs
Position
17:complement(12768283..12908676)
Genome browser
AA seq
1849 aa
AA seq
DB search
MYEGKKTKNMFLTRALEKILADKEVKKAHHSQLRKACEVALEEIKAETEKQSPPHGEAKA
GSSTLPPVKSKTNFIEADKYFLPFELACQSKCPRIVSTSLDCLQKLIAYGHLTGNAPDST
TPGKKLIDRIIETICGCFQGPQTDEGVQLQIIKALLTAVTSQHIEIHEGTVLQAVRTCYN
IYLASKNLINQTTAKATLTQMLNVIFARMENQALQEAKQMEKERHRQHHHLLQSPVSHHE
PESPQLRYLPPQTVDHISQEHEGDLDPHSHDVDKSLQDDTEPENGSDTSSAENEQTEADQ
AAAAETLSKNDVLYDGENHDCEEKPRDIVQSIVEEMVNVIVGDMGERATINASADGNIGT
IEDGSDSENIQANGIPGTPISVAYTPSLPDDRLSVSSSDTQESGNSSGPSPGAKFSHILQ
KDAFLVFRSLCKLSMKPLSDGPPDPKSHELRSKILSLQLLLSILQNAGPIFRTNEMFINA
IKQYLCVALSKNGVSSVPEVFELSLSIFLTLLSNFKTHLKMQIEVFFKEIFLYILETSTS
SFDHKWMVIQTLTRICADAQSVVDIYVNYDCDLNAANIFERLVNDLSKIAQGRGSQELGM
SNVQELSLRKKGLECLVSILKCMVEWSKDQYVNPNSQTTLGQEKPSEQETNEIKHPETIN
RYGSLNSLESTSSSGIGSYSTQMSGTDNPEQFEVLKQQKEIIEQGIDLFTKKPKRGIQYL
QEQGMLGTTPEDIAQFLHQEERLDSTQVGEFLGDNDKFNKEVMYAYVDQHDFSGKDFVSA
LRMFLEGFRLPGEAQKIDRLMEKFAARYLECNQGQTLFASADTAYVLAYSIIMLTTDLHS
PQVKNKMTKEQYIKMNRGINDSKDLPEEYLSAIYNEIAGKKISMKETKELTIPTKSSKQN
VASEKQRRLLYNLEMEQMAKTAKALMEAVSHVQAPFTSATHLEHVRPMFKLAWTPFLAAF
SVGLQDCDDTEVASLCLEGIRCAIRIACIFSIQLERDAYVQALARFTLLTVSSGITEMKQ
KNIDTIKTLITVAHTDGNYLGNSWHEILKCISQLELAQLIGTGVKPRYISGTVRGREGSL
TGTREQAPDEFVGLGLVGGNVDWKQIASIQESIGETSSQSVVVAVDRIFTGSTRLDGNAI
VDFVRWLCAVSMDELLSTTHPRMFSLQKIVEISYYNMGRIRLQWSRIWEVIGDHFNKVGC
NPNEDVAIFAVDSLRQLSMKFLEKGELANFRFQKDFLRPFEHIMKRNRSPTIRDMVVRCI
AQMVNSQAANIRSGWKNIFSVFHLAASDQDESIVELAFQTTGHIVTLVFEKHFPATIDSF
QDAVKCLSEFACNAAFPDTSMEAIRLIRHCAKYVSDRPQAFKEYTSDDMNVAPEDRVWVR
GWFPALFELSCVINRCKLDVRTRGLTVMFEIMKTYGHTYEKHWWQDLFRIVFRIFDNMKL
PEQQTEKAEWMTTTCNHALYAICDVFTQYLEVLSDVLLDDIFAQLYWCVQQDNEQLARSG
TNCLENVVILNGEKFTLEIWDKTCNCTLDIFKTTIPHALLTWRPASGEAAPTPPSPVSEK
QLDTISQKSVDIHDSIQPRSADNRQQAPPASVSTVNEEVSKVKPTAKFPEQKLFAALLIK
CVVQLELIQTIDSIVFFPATSKKEDAENLAAAQRDAVDFDVRVDTQDQGMYRFLTSQQLF
KLLDCLLESHRFAKAFNSNNDQRTALWKAGFKGKSKPNLLKQETSSLACGLRILFRMYMD
ESRASAWEEVQERLLNVCREALSYFLTLTSESHREAWTNLLLLFLTKVLKISDNRFKAHA
SFYYPLLCEIMQFDLIPELRAVLRRFFLRIGVVFQISQPPEQELGTNKQ
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atgtatgaggggaagaagacgaagaacatgtttctgacccgggccctggagaagattttg
gccgacaaggaagtgaagaaggcgcatcactcccagctgcgcaaagcgtgcgaggtggcg
ttagaggaaataaaagcggaaactgaaaagcagagtcctcctcatggagaagcaaaagct
ggatcaagcacccttccaccagtgaaatcaaagacaaattttatcgaagcagacaagtac
ttcctgccctttgaattggcatgccagtccaagtgtcctcgcatagttagtacatctcta
gattgtttacagaaacttattgcttatgggcacttgactggcaatgctccagatagtaca
acaccaggcaaaaaattaattgatagaattattgaaacaatttgtggctgtttccaaggt
cctcaaacagatgaaggagttcagttacaaataataaaggctttacttactgcagtaaca
tctcaacacatagaaattcacgaaggaactgtactgcaagctgtgagaacatgttacaat
atctatctagcaagcaaaaatctcatcaatcagacaacagccaaagctactcttactcag
atgctaaatgttatctttgcacgcatggaaaaccaagcattgcaggaagccaaacaaatg
gaaaaagaaaggcatcgacagcatcatcatctgttgcagtctccagtaagccatcatgag
cctgaatcacctcaacttagatatttgccacctcagactgttgatcatatatcccaggaa
catgaaggggaccttgatccccattcacatgatgtggataaaagccttcaggatgataca
gaacctgaaaatggatctgatacttccagtgcagaaaatgaacagactgaagctgatcag
gcagctgcagccgaaacattatctaaaaatgatgtattatacgatggagaaaaccatgac
tgtgaggaaaagccacgagatattgtgcagagcattgtagaagaaatggtgaacgtcatc
gttggagatatgggagagagggctaccataaatgcaagtgcagatggcaacattggaacc
atagaggatggtagtgacagtgaaaatattcaagcaaatggaattccaggaacaccaatt
tctgttgcatatacaccttccttacctgatgacagattgtctgtctcttccagtgatact
caggaatctggaaattcttcagggccttcacctggtgctaagttttcccacattttacaa
aaggatgcctttctagtattcaggtcattgtgtaaactgtcaatgaaaccactgtcggat
ggaccgccagatccaaagtctcatgagttacgatccaagattctttcattgcagttactt
ctatccattctgcagaatgcaggacctattttcaggacaaatgagatgtttattaatgct
attaagcagtatctgtgtgttgcactctcaaaaaatggagtttcttctgttccagaggtt
tttgagctttccctttccatatttcttactttgttgtcaaacttcaagacgcatctgaag
atgcagattgaggtgttctttaaagaaattttcctatacattttggagacttctaccagc
tcatttgaccacaaatggatggtcattcagacgttgacaaggatttgtgcagatgctcag
agtgtggtggatatttacgtaaactatgattgtgacttaaatgcagcaaacatatttgaa
agactagtaaatgatctatcaaaaattgctcaaggacgaggcagtcaagaactcggtatg
agtaatgttcaggaactgagcctgaggaaaaaaggtttagaatgcttagtgtcaattttg
aagtgtatggttgaatggagtaaggatcagtatgtgaatcccaactctcagaccactctt
ggtcaggaaaaaccctcagagcaagagacaaatgaaataaaacaccctgagacaataaac
agatacggaagtttaaattccctggagtcaacatcatcatcaggaataggcagctacagc
acacagatgtctggcactgacaatccagagcaatttgaagtcctaaagcagcaaaaggaa
ataatagaacaggggatagatttatttaccaagaaaccaaagagaggaatacagtacctc
caagaacaagggatgcttggcactacacctgaagatattgcccagttcttacatcaggag
gaaagattagactctactcaagtaggtgaattcctgggagataatgataaatttaacaaa
gaagtcatgtatgcatatgtggaccaacacgacttttcaggaaaggattttgtttcagcc
cttcgtatgtttctggaaggattccgtcttccaggggaagctcagaaaattgatcgattg
atggaaaagtttgctgcaagatacttagaatgcaaccaaggacaaaccctctttgctagt
gcagatactgcgtatgttctggcgtattcaattatcatgctcaccacagaccttcacagc
ccacaggttaaaaataaaatgacaaaggaacagtacattaagatgaatagaggtatcaat
gacagtaaagatcttcctgaagagtatctatcagccatctataatgaaatagctggaaaa
aagatatcaatgaaagaaacaaaagaactaacaatccctacaaaatcaagtaaacaaaat
gtagccagtgaaaaacaaagaagacttctgtataacttagaaatggaacagatggccaag
acagctaaagcactcatggaggccgtgagccatgttcaagcacctttcacaagtgcgaca
catttggagcatgtgagacctatgtttaagttggcttggaccccttttctggctgcgttc
agtgtgggtctacaagactgtgatgatactgaagtagcctctctttgcctggaaggtata
agatgtgcaatcagaattgcatgcattttcagcattcagctggaaagagatgcatatgtc
caggcgctagcaagatttaccttacttacagtgagttctgggattactgaaatgaaacag
aagaacattgacacaattaaaacacttatcacagtggctcatacagatggaaattatcta
ggaaattcatggcatgagattctgaagtgcatcagtcagttggagcttgcacaacttata
ggaactggagtgaaacctcggtacatttctggaacagttcgaggcagagaaggatctctt
actggaacaagagagcaggctcctgatgaatttgtgggtctcgggctagttggaggaaat
gtggactggaagcagatagcaagtattcaggaatccattggagagaccagttctcagagt
gttgtcgttgccgtagatagaatatttacagggtccacaaggctagatggaaatgctatt
gtggactttgtccgttggctctgtgctgtgtctatggatgaattactttccactacacat
ccaagaatgtttagtctacaaaaaatagtagaaatatcatattacaacatgggaagaata
agactgcagtggtctcgaatttgggaagttattggagatcattttaataaggttggctgt
aatcctaatgaagatgtagctatttttgcagtagactccttgaggcaattgtcaatgaag
ttcttagagaaaggggagcttgctaatttcagattccagaaggatttcttaagacctttt
gaacatataatgaaacggaacaggtctccaacaattcgagatatggttgtacggtgtata
gcacagatggttaattctcaagctgctaacattcggtctggatggaagaacattttctct
gtatttcatctagcggcatccgatcaagatgaaagcatagttgaacttgcattccaaaca
acggggcatattgtcacccttgtgtttgaaaaacactttccagcaaccattgattctttc
caggatgcagtgaaatgcttgtctgaatttgcatgcaatgcagctttcccagacacaagt
atggaagcgattcgacttattcgccattgtgcaaaatatgtgtctgatagacctcaggct
ttcaaggaatacacaagtgacgacatgaatgtggcacctgaagacagagtttgggtgagg
ggatggttcccagctctctttgagttgtcctgtgtcatcaacagatgcaagttagatgtg
agaaccaggggtttaacagtaatgttcgaaataatgaaaacttacggccacacttatgaa
aaacactggtggcaggatttatttagaattgttttcagaatcttcgacaacatgaagttg
ccagaacagcagacagagaaagctgagtggatgacaacgacatgtaatcatgcgctttat
gctatctgcgatgtgttcacccagtatttagaagtactcagtgatgtacttttggatgac
atttttgcccagctctactggtgtgtgcagcaagacaatgagcagttagcacgatctggt
acgaactgcttagagaatgttgttattctgaatggtgaaaaatttaccctagaaatctgg
gataaaacttgtaactgcacactggacatcttcaaaaccacaattccacatgcgctcttg
acctggcgtcctgcttctggagaagctgctcctacacctccgtctcctgtgagtgaaaaa
cagctggatacgatatcacagaaatctgtagatattcatgattctattcagccaagatct
gcagataatagacagcaagctccaccggcttctgtctctactgtgaatgaagaagtcagc
aaagttaaacccacagcaaaatttccagaacaaaaattgtttgccgccctgttgattaaa
tgtgttgtgcagctggaactcatccagaccatcgacagcatcgtgttctttcctgccaca
agtaagaaggaggacgcggaaaacttagccgcagcgcagagagacgccgtggactttgac
gttcgagttgatactcaggaccaaggaatgtatcgctttctaacatcgcaacaactcttc
aagctgctggactgcttgttggagtcacacagatttgcaaaagcatttaactccaacaat
gaccagaggacggctctgtggaaggcgggcttcaagggcaaatccaaacccaaccttctg
aagcaggagacgagcagcctggcctgcgggctgcgcatcctcttccggatgtacatggat
gagagccgggcgagcgcctgggaggaggtccaggagaggcttttaaatgtctgcagagaa
gccctgagttacttccttaccctaacatcggaaagtcatcgggaagcctggactaactta
ctgcttttgtttctaactaaagtcctgaagatcagcgacaataggtttaaagctcacgca
tcattctactaccctctcttatgtgaaattatgcaatttgacttgattcctgaacttcgt
gctgttcttagaagattttttctgcgaattggagtagtttttcagatatcacaaccacct
gaacaggaacttggaacaaacaagcagtga
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integrated database retrieval system
