Phocoena sinus (vaquita): 116743966
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Entry
116743966 CDS
T07759
Symbol
CNGB1
Name
(RefSeq) cyclic nucleotide-gated cation channel beta-1
KO
K04952
cyclic nucleotide gated channel beta 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04022
cGMP-PKG signaling pathway
psiu04024
cAMP signaling pathway
psiu04740
Olfactory transduction
psiu04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09132 Signal transduction
04024 cAMP signaling pathway
116743966 (CNGB1)
04022 cGMP-PKG signaling pathway
116743966 (CNGB1)
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
116743966 (CNGB1)
04740 Olfactory transduction
116743966 (CNGB1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116743966 (CNGB1)
Ion channels [BR:
psiu04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
116743966 (CNGB1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
Motif
Other DBs
NCBI-GeneID:
116743966
NCBI-ProteinID:
XP_032469094
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All DBs
Position
19:complement(31961624..32045948)
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AA seq
1232 aa
AA seq
DB search
MLGWVQRVLPQPPGTPVKREEEEGAEPEPDLEPEPETAPEETELEEESLPPEEACVGKEV
AEADPGPQETQEAAPSPPTSLQAQVAVVPEANSGPSSRVLSWLRKGVEKVVPQPVHSGRP
AQSTAAGLEGPAQQAGGQILGHCSTGGSDGHSEAPRAQDTGPGPWLLRWLEQNLEKMLPQ
PPKTSEGWRDEPADAALGPEPPGPALEMEPVPQAQESPSLPAPAPPEPEEELTPEPQPGI
QASSLPPTQDPARLMAWLLHRLEMALPQPVVRGKAGEQEPDSPVTCDVQSISILPGEQEE
PSLILEDVDPHWEEYEYQEVSSPRGSEAAPADEEESEVVEQMPRELPQIQEEKEDEEEED
GEEEEDEEEEEDGEEEEPEPLQSQDALINSHSVLLDSCLVAQGGEDQSGVGGTEHQSASH
QELQEEAVAASSGVPATEEHPEVQVEDADADSQPLNEEENPPSPVSLPPSPAKCDTLGVP
GSATGSLRKRLCSQDDEAEELKMLSPAVSPVVACSDPTSPQGTDDQDRAASTDSQTSALI
NNRLQELVKLFKERTEKVKEKLIDPDVTSDEESPKPSPAKKAPEPALDVKPAEAGQVEEE
HYCEMLCCKFKRRPWKKCQFPQSIDPMTNLMYILWLFFVVLAWNWNCWLIPVRWAFPYQM
PDNIHLWLLVDYLCDLIYLLDITVFQLRLQFVRGGDIITDKKEMRNNYLKSQRFKMDMLC
LLPLDFLYLKFGVNPLLRLPRCLKYMAFFEFNNRLESILSKAYIYRVIRTTAYLLYSLHV
NSCLYYWASAYEGLGSTHWVYDGVGNSYIRCYYWAVKTLITIGGLPDPRTLFEIVFQGLN
YFTGVFAFSVMIGQMRDVVGAATAGKTYYRSCMDSTVKYMNFYKIPRSVQNRVKTWYEYT
WHSQGMLDESELMVQLPDKMRLDLAIDVNYDIVSKVALFQGCDRQMIFDMLKRLRSVVYL
PNDYVCKKGEIGREMYIIQAGQVQVLGGPDGKSVLVTLKAGSVFGEISLLAVGGGNRRTA
NVIAHGFTNLFILDKKDLNDILVHYPESQKLLRKKARRMLRNDNKPKEQSVLILPPRPGT
PKLFSATLAAAGKMGAKGAKDGKLAHLRARLKELAALEAAARQQQVLEQAKSLEGAAGET
GSATPKQPAAPETPAPGSPPPASQGRSEGEEGGAAWPEEHSVRIHMSPGPDPREQILLVE
IPEKEEKEEEEEEEGEGEEGEEGEEEEGEGKE
NT seq
3696 nt
NT seq
+upstream
nt +downstream
nt
atgctgggctgggtccagagggtgctgcctcagcccccagggacaccagtgaagagagag
gaggaggagggggcagaaccagagccagacttggagccggagcctgaaacagcccctgag
gagactgagctagaggaagagtccctgccacctgaggaggcctgcgtggggaaggaagtg
gctgaggctgatccgggacctcaggaaacccaggaggctgccccttctccacccacatcc
ctccaggctcaggtcgctgtggttccagaagcgaacagtggtcccagcagccgggtgctg
agctggctcagaaagggtgtggagaaggtcgttccacagcccgtccacagtggcaggccc
gcccagagcaccgctgctggcttggagggtccagctcagcaggcaggaggacagatcctt
gggcactgcagcactgggggctcagatggacacagcgaggctcccagggcccaagacacc
gggcccgggccctggctgctcaggtggcttgagcagaatctggagaaaatgctgcctcag
cctccgaaaacctccgagggctggagagatgagcctgcggatgctgccttgggtccagag
cccccaggacccgccttggaaatggagcccgtgccgcaggcccaggagagcccctccctg
cctgctcctgcccccccggagcccgaggaggagctgactccagagccccagcccggaatc
caggcctcctccctgccgcccacccaggaccctgccaggttgatggcatggctcctgcac
cggctggagatggccctgccacagccagtggtccgtgggaaggctggggagcaggagcct
gactcccctgtgacatgtgacgtgcagagcatcagcatcctcccgggagagcaagaggag
cccagtctcatcctagaagatgttgaccctcactgggaggagtatgagtaccaggaggtc
agcagcccacggggctcagaggcagctccagctgatgaagaggagagcgaggtggtggag
cagatgcccagggagctgcctcagattcaagaggagaaagaagatgaggaggaggaggac
ggagaggaggaggaggacgaagaggaggaggaggacggagaggaggaggaacctgagcct
ctccagagccaggatgctctcattaacagtcacagtgtcctgctggatagctgtctggtg
gcgcagggaggcgaggaccagagtggagtaggtggaactgagcaccagagcgcctcacac
caggagctgcaggaggaggccgtggccgccagctcaggagtacctgccacggaagagcac
ccggaagtgcaggtggaagacgctgatgctgacagccagcccctcaacgaggaggagaat
ccaccctctcccgtgtcgctgcccccgtctcctgccaaatgcgacacacttggggtccca
ggatcagccacagggagcctcaggaagaggctgtgctcccaagatgatgaggctgaagag
ctcaagatgctgtcaccggctgtatcgcccgtggtcgcttgttcggaccccaccagcccg
cagggcactgatgaccaggaccgcgcagcctccacagacagccagaccagtgccctcatc
aacaaccggctccaggagctggtgaagcttttcaaggagcggacggagaaggtgaaggag
aagctcatcgaccctgatgtcacctctgatgaagagagccccaagccctccccagccaag
aaagccccagagccggccctggatgtgaagccagctgaagcggggcaggtggaggaggaa
cactattgtgaaatgctctgctgcaagttcaaacgccgcccctggaagaagtgccagttt
ccccagagcatcgacccgatgaccaacctgatgtacatcctgtggctgttcttcgtggtg
ctggcctggaactggaactgttggctgattcccgtgcgctgggccttcccctaccagatg
ccggacaacatccacctctggctgctggtggattacctgtgtgacctcatctacctcctg
gacatcaccgtgttccagctgcgtctgcagtttgtcagaggcggggacatcattacagac
aaaaaggagatgcgcaacaattacctgaaatctcagcgctttaagatggatatgctctgc
ctcttgcccttggactttctctacttgaaattcggtgtgaatcccctcctgcgcttgccc
cgctgtttgaagtacatggccttcttcgagtttaacaaccgcctggaatccatcctcagc
aaagcctacatttacagggttatcaggaccacagcctacctgctctacagtctacatgtg
aactcatgtctgtattactgggcttcagcctatgagggccttggctccactcactgggtt
tatgatggcgtgggaaacagttacattcgctgttactactgggctgtgaagaccctcatc
accatcggcggcctgcccgaccccaggacgctctttgaaattgtcttccagggtctgaac
tatttcacaggtgtcttcgctttctccgtgatgattggacagatgagagacgtggtgggg
gccgctactgcgggaaagacctactaccgcagctgtatggacagcacagtgaagtacatg
aacttctacaagatccccaggtccgtgcagaaccgggtcaagacctggtatgagtacacc
tggcactcccaaggcatgctggacgagtcagagctgatggtgcagcttccagataagatg
cggctggacctcgccatcgatgtgaactatgacatcgtcagcaaagtggcactcttccag
ggctgtgaccggcagatgatcttcgacatgctgaagagacttcgttctgttgtctacctg
cccaacgactacgtgtgcaagaagggggagataggccgggagatgtacatcatccaggcg
gggcaggtgcaggtcttgggcggcccggatgggaagtccgtgctggtgacgctgaaagct
ggatctgtgtttggagaaataagcttgctggctgttgggggcgggaaccggcgcacggct
aacgtgatagcccacgggtttaccaacctcttcattctggataagaaagacctgaatgac
attttggtgcattatcctgagtctcagaagttgctccggaagaaggccaggagaatgctg
agaaatgacaacaaacccaaggagcagagcgtactcatccttcctccacggccaggcacc
cccaagctcttcagcgccaccctggctgcagcaggaaagatgggtgccaagggggccaaa
gatggcaagcttgcccacctcagggcgcgactcaaggagctggctgcgctggaggcggct
gcaagacagcagcaggtgctggaacaggccaagagtttggaaggcgcagcgggagagacg
ggatcagctaccccaaaacagcccgcggccccggagacccccgccccaggctctccgcca
cctgcatcccaggggaggtccgaaggagaagaggggggtgcggcctggcccgaggagcac
tcggtgcggatccacatgagcccaggcccggatcccagggaacagatcctgttggtggag
atccccgagaaggaggagaaggaggaggaggaggaagaggagggggagggcgaggagggt
gaggagggggaggaggaggagggggagggaaaggag
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integrated database retrieval system
