Phocoena sinus (vaquita): 116746358
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Entry
116746358 CDS
T07759
Symbol
AATF
Name
(RefSeq) protein AATF isoform X1
KO
K14782
protein AATF/BFR2
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
psiu03009
]
116746358 (AATF)
Ribosome biogenesis [BR:
psiu03009
]
Eukaryotic type
90S particles
Other 90S particles
116746358 (AATF)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AATF-Che1
TRAUB
Vif
Motif
Other DBs
NCBI-GeneID:
116746358
NCBI-ProteinID:
XP_032473688
Ensembl:
ENSPSNG00000017487
UniProt:
A0A8C9CGD6
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Position
20:32078723..32197827
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AA seq
566 aa
AA seq
DB search
MAGPQPLALQLEQLLNPRPREADPEADPEEATAAKVIDRFDEGEDGEDDFLAVGSIRKLA
SASLLDTDKRYSGKTTSRRAWKADHWEQTLPGSSDQEISDEEGSGGGDSEGLGLEESGED
AMSAEELECADGDSSLAWKKRSRSHSRKASGFSVQSISDFEKFTEGMDHLGSSEDEEDEE
QESGMEEGGGEEDFEGESEEDKAEDRTSEDDGVVMTFSEVKVSEEVEKGQAVKNQIALWD
QLLEGRIKLQKALLTTNQLPQPDVFPIFKDKGGPEFASALKNSHKALKALLRSLVDLQEE
LLFQYPDTRYLVDGTKPKAESEEEISSEDEELIEEKQQQQRRAPAKRKLETEDYPSFIAK
RFADFTVYRNRTLQKWHDKTKLASGKLGKGFGAFERSILTQIDHILMDKERLLRRTQTKR
SIYRVLGKPEPAAQPVPESLPGQPEILPQAPASAHLKDVDEEIFDDDDFYHQLLRELIER
KTSSLDPNDQVAMGRQWLAIQKLRSKIHKKVDRKASKGRKLRFHVLSRLLSFMAPIDHTT
MNDDARTELYRSLFGQLNPPDEGHGD
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
atggcggggccgcagcctttagccctgcagctggaacagttgttgaacccgcgaccgcgc
gaggcggatcctgaggccgacccggaggaggccactgctgccaaagtgattgacaggttt
gatgaaggggaagatggggaagatgatttcctggcggtgggtagcattagaaagctggca
tcagcctccctcttggacacagacaagaggtattctggcaagaccacctctagaagagct
tggaaggcagaccattgggagcagactctgccaggttcatctgatcaagaaatatctgat
gaggaagggtctggaggtggagattcagagggtctgggcctggaggaatccggtgaggat
gccatgagtgctgaggaactggagtgtgctgatggtgacagtagcctggcctggaaaaag
aggagcagaagccactccaggaaggcgtcgggcttcagtgtccagagcatcagtgacttt
gaaaagtttaccgagggaatggatcacctcggtagcagtgaggacgaggaagacgaagag
caggagagtggtatggaggaagggggtggtgaggaagactttgaaggtgagagtgaggaa
gacaaagctgaagacaggaccagtgaggacgacggggtggtgatgaccttctccgaggtc
aaagtttccgaggaagtggagaaaggccaagctgtgaagaaccagatagcactgtgggac
cagctcttggaaggaaggataaagctacaaaaagctctgctgaccaccaatcagcttcct
caaccagatgttttccctattttcaaggacaaaggtggcccagaatttgccagcgccttg
aaaaacagtcacaaggcacttaaagcattgttgaggtcattggtagatcttcaggaagag
ttgcttttccagtatccagacactagatacctagtagatgggacaaagcccaaagcagaa
agtgaggaggagatttccagtgaagatgaagagctcatagaagagaagcagcagcagcag
aggagggccccagcaaagaggaagctggagactgaggactaccccagcttcatagcgaag
cgcttcgccgacttcactgtctacaggaaccgtacgctccagaagtggcatgataagacc
aagctggcttctggaaaactggggaagggttttggtgcctttgaacgttcaatcttgact
cagattgatcatattctgatggacaaagaaagattacttcgaaggacacagaccaagcgc
tctatctaccgagttcttggcaaacctgagcctgcagcccagcctgtcccagagagtttg
ccaggacagccggagatccttcctcaagcccctgccagtgcccacctgaaggacgtggat
gaagaaatctttgatgatgatgacttttaccaccagctccttcgagaactcatagaacgg
aagacgagctccttggatcccaatgatcaggtggccatgggaaggcagtggcttgcaatc
cagaagttaagaagcaaaatccacaagaaagtagataggaaagcgagcaaaggaaggaaa
cttcggtttcacgtccttagcaggcttctgagcttcatggcacctattgaccataccaca
atgaatgatgatgccaggacagagctgtatcgatctctttttggccaactcaacccccct
gacgaaggccacggggactga
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