Phocoena sinus (vaquita): 116747739
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Entry
116747739 CDS
T07759
Name
(RefSeq) LOW QUALITY PROTEIN: elongation factor 1-alpha 1-like
KO
K03231
elongation factor 1-alpha
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03013
Nucleocytoplasmic transport
psiu05134
Legionellosis
psiu05140
Leishmaniasis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116747739
09160 Human Diseases
09171 Infectious disease: bacterial
05134 Legionellosis
116747739
09174 Infectious disease: parasitic
05140 Leishmaniasis
116747739
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116747739
03016 Transfer RNA biogenesis [BR:
psiu03016
]
116747739
03012 Translation factors [BR:
psiu03012
]
116747739
04131 Membrane trafficking [BR:
psiu04131
]
116747739
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
psiu04147
]
116747739
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
116747739
Transfer RNA biogenesis [BR:
psiu03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
116747739
Translation factors [BR:
psiu03012
]
Eukaryotic type
Elongation factors
116747739
Membrane trafficking [BR:
psiu04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
116747739
Exosome [BR:
psiu04147
]
Exosomal proteins
Proteins found in most exosomes
116747739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
Motif
Other DBs
NCBI-GeneID:
116747739
NCBI-ProteinID:
XP_032476153
LinkDB
All DBs
Position
X:complement(125389812..125457077)
Genome browser
AA seq
721 aa
AA seq
DB search
MGKEKTHINTAVIGHVDSGKATTTGHLIYKCGGIDKRTTEKFKEEAAEMGKGSFKYAWVL
NKLKAEREHGITIDISLWKSETSKYYVIITDAPGHRDFIKNMITGTSQADWAVLIVAAGA
GGFEAGIXNGQTREQALLAYTLGVKQLIVGVNKMDSTEPPYSRKRHEETVKEVSTYIKKI
GYNPXTVALVPVSGWNGENVLEPSANMPWFKGWRVTRKDGNATGTTTLFEALDCILPPIR
PTDKPLRLPLQDVYKIGGIGAVPVGRGETGVLKPGMVVTFAPVNVTTXKSAEMHHEALSE
ALPGDNVGFKVKNVSVKDVRRGNVAGDSKNDPPMEAAGFTAQVIILNHPGQSSAGYAPVL
DCHTAHIACKFAELKEKIDRRSGKKLEDGPKFLKSGDAAIIDTVPGKPMCAESLSDYLPL
GRFAARDMRRTVALGVIKAVDKKAAGAGKVTKSTQKAQKAKWIHLCTIFHKPLGDKLTVF
GEEPTKPVNPSWVPIKPTNLRLPPSGGRTGARPLIKCALTSERPTLGANFKNPQSGKPDA
AVGPDRVSPARWSPKPPLGARVRGTWAERVAGKVCAPRRAVRGPGWRRGRWPPRKRRAAG
GTSPLPAPRGRPPASGTWKVGGISGGQHPVRWEGHPASRSGRKSRRRSRASAPGQYRIRF
GPDATLWTWSVKRRPRDLHPSLGPHLPPPGHPTEESRRPGPEVAKSKWEGVPGAPPNPGS
S
NT seq
2166 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaggagaagacccacatcaacaccgctgtcatcggacacgtagattcggggaag
gctaccactactggccatctgatctacaaatgtggtgggatcgacaagagaaccactgaa
aagttcaaggaggaggctgccgagatgggcaagggctccttcaagtatgcctgggtcctg
aacaaactgaaagctgaacgcgagcatggcatcaccattgatatctccctctggaagtct
gagaccagcaagtactatgtgatcatcactgatgccccaggacacagagacttcatcaaa
aacatgattacaggcacatcccaggctgactgggctgtcctgattgttgctgctggtgct
ggtggatttgaagcaggtattntgaatgggcagacccgtgagcaggcccttctggcctac
actctgggtgtgaaacaactaattgttggagtcaacaaaatggattccactgagccaccc
tacagccggaagagacacgaggaaactgttaaggaagtcagcacctacattaagaaaatt
ggctacaacccgnacacagtagcacttgtgccagtttctggctggaatggtgaaaacgtg
ctggagccaagtgctaacatgccgtggttcaagggatggagagtcacccgaaaagatggc
aatgccactggaaccaccacactgtttgaagctctggattgcatcctgccaccaattcgc
ccaactgacaagcccttgcgtttgcccctccaggacgtctacaaaattggtggtattggc
gctgtccctgtgggtcgaggggagactggtgttctcaaacccggcatggtggtcaccttt
gctccagtcaacgtgacaactnngaagtctgctgaaatgcaccatgaagctttgagtgaa
gcccttcctggggacaatgtgggcttcaaggtcaagaacgtgtctgtcaaagatgttcgt
cgtggcaatgtggctggtgacagcaaaaatgacccaccgatggaagcagctggcttcaca
gctcaggtgattatcttgaaccatccaggccaaagcagtgctggctacgcacctgtgctg
gattgtcacacagctcacattgcctgcaagttcgctgagctgaaggagaagattgatcgt
cgttctgggaaaaagctggaagatggccccaaattcttgaaatctggtgatgctgccatc
attgatacggttcctggcaaacccatgtgtgctgagagcctctctgactatcttcctctg
ggccgctttgctgctcgtgacatgagacggacggttgctctgggtgtcatcaaagcagtg
gacaagaaggcagctggagctggcaaggtcaccaagtccacccagaaagctcagaaggct
aaatggattcacctctgcaccatctttcacaaacctctcggggacaagctgacggtattt
ggggaagagccgactaaacctgtgaatccgagctgggtgcccattaaacccacaaacctg
cggctgcctcccagtggggggcggacgggggctcggccgctaattaaatgtgcgttgacg
tcggagcggccaactttaggggccaacttcaaaaaccctcagtctggaaagccagacgcc
gcggtcggcccggaccgggtgtcccccgcgcggtggtccccgaagccgccgctcggcgcc
cgagtgcggggaacttgggccgagcgggtggcagggaaggtgtgcgcgccgcgccgcgcc
gtgcggggaccggggtggcggcgggggcggtggccgccgaggaagcggagggccgccggt
ggcacctcgccgctgcctgccccccgcggccggccgccggcgtcgggcacctggaaagtt
gggggcatttcgggcgggcagcatccggtgcgctgggaaggccacccggccagccgttcg
gggagaaaatcccggcggaggtcgcgcgcctcagcccccgggcagtaccggatccgattt
gggccagacgcaactctttggacttggagtgtcaaacgacgccctcgggacctgcatccc
tccctcggtccccacctccccccacccgggcacccgaccgaggagtcgcggcggccgggg
ccagaggtggccaagagcaagtgggaaggcgtcccgggcgccccaccaaaccccggctcc
tcttaa
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