Phocoena sinus (vaquita): 116751322
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Entry
116751322 CDS
T07759
Symbol
ETF1
Name
(RefSeq) eukaryotic peptide chain release factor subunit 1 isoform X1
KO
K03265
peptide chain release factor subunit 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
116751322 (ETF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116751322 (ETF1)
03012 Translation factors [BR:
psiu03012
]
116751322 (ETF1)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
116751322 (ETF1)
Translation factors [BR:
psiu03012
]
Eukaryotic type
Release factors
116751322 (ETF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eRF1_2
eRF1_3
eRF1_1
baeRF_family10
acVLRF1
Ribosomal_L7Ae
Motif
Other DBs
NCBI-GeneID:
116751322
NCBI-ProteinID:
XP_032482964
Ensembl:
ENSPSNG00000015022
UniProt:
A0A8C9C6B2
LinkDB
All DBs
Position
3:56432880..56461181
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AA seq
437 aa
AA seq
DB search
MADDPSAADRNVEIWKIKKLIKSLEAARGNGTSMISLIIPPKDQISRVAKMLADEFGTAS
NIKSRVNRLSVLGAITSVQQRLKLYNKVPPNGLVVYCGTIVTEEGKEKKVNIDFEPFKPI
NTSLYLCDNKFHTEALTALLSDDSKFGFIVIDGSGALFGTLQGNTREVLHKFTVDLPKKH
GRGGQSALRFARLRMEKRHNYVRKVAETAVQLFISGDKVNVAGLVLAGSADFKTELSQSD
MFDQRLQSKVLKLVDISYGGENGFNQAIELSTEVLSNVKFIQEKKLIGRYFDEISQDTGK
YCFGVEDTLKALEMGAVEILIVYENLDIMRYVLHCQGTEEEKILYLTPEQEKDKSHFTDK
ETGQEHELIESMPLLEWFANNYKKFGATLEIVTDKSQEGSQFVKGFGGIGGILRYRVDFQ
GMEYQGGDDEFFDLDDY
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgaccccagtgctgccgacaggaacgtggagatatggaagatcaaaaagctc
attaagagcttggaggcggcgcgcggcaatggcacaagcatgatatcattgatcattcct
cccaaagaccagatttcacgagtggcaaaaatgttagcagatgagtttggaactgcatct
aacattaagtcacgagtaaaccgcctttcagtcctgggagccattacatctgtacaacaa
agactcaaactttataacaaagtacctccaaatggcctggttgtttactgtggtacaatt
gtaacagaagaaggaaaagaaaagaaagtcaacattgactttgaacctttcaaaccaatt
aatacttcattgtatttgtgtgacaacaaattccatacagaggctcttacagcactactt
tcagatgatagcaagtttggcttcattgtaatagatggtagtggtgcactttttggcaca
ctccaaggaaatacaagagaagttctgcacaaattcaccgtggatctcccaaagaaacat
ggtagaggaggtcagtcagccttgcgttttgcccgtttaagaatggaaaagcgacataac
tatgttcggaaagtagctgagactgctgtgcagctgtttatttctggggacaaagtgaat
gtggctggtcttgttttagctggatcagctgactttaaaactgaactaagtcaatctgat
atgtttgatcagaggttgcaatcaaaagttttaaaattagttgatatatcttatggtggt
gaaaatggattcaaccaagctattgagttatctactgaagtcctctccaacgtgaagttc
attcaagagaagaagttaatagggcgatactttgatgaaatcagccaggacacgggcaag
tactgttttggagttgaagatacactaaaggctttagaaatgggagctgtagagattcta
atagtctatgaaaatctggatataatgagatatgttcttcattgccaaggcacagaagag
gagaaaattctctatctaactccagaacaagagaaggataaatcccattttacagacaaa
gagacaggacaagaacatgagttgattgagagcatgcccctgctggagtggtttgctaac
aactataaaaaatttggagctacattggaaattgtcacagataagtcacaagaaggatcc
cagtttgtgaaaggatttggtggaattggaggtatcttgcggtaccgagtagatttccag
ggaatggaataccaaggaggagatgatgaattttttgaccttgatgactactag
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