Phocoena sinus (vaquita): 116753352
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Entry
116753352 CDS
T07759
Symbol
PSMD2
Name
(RefSeq) 26S proteasome non-ATPase regulatory subunit 2 isoform X1
KO
K03028
26S proteasome regulatory subunit N1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03050
Proteasome
psiu05010
Alzheimer disease
psiu05012
Parkinson disease
psiu05014
Amyotrophic lateral sclerosis
psiu05016
Huntington disease
psiu05017
Spinocerebellar ataxia
psiu05020
Prion disease
psiu05022
Pathways of neurodegeneration - multiple diseases
psiu05169
Epstein-Barr virus infection
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
116753352 (PSMD2)
09160 Human Diseases
09172 Infectious disease: viral
05169 Epstein-Barr virus infection
116753352 (PSMD2)
09164 Neurodegenerative disease
05010 Alzheimer disease
116753352 (PSMD2)
05012 Parkinson disease
116753352 (PSMD2)
05014 Amyotrophic lateral sclerosis
116753352 (PSMD2)
05016 Huntington disease
116753352 (PSMD2)
05017 Spinocerebellar ataxia
116753352 (PSMD2)
05020 Prion disease
116753352 (PSMD2)
05022 Pathways of neurodegeneration - multiple diseases
116753352 (PSMD2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
psiu03051
]
116753352 (PSMD2)
Proteasome [BR:
psiu03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
116753352 (PSMD2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN1_RPN2_N
RPN1_C
PC_rep
THAP
Motif
Other DBs
NCBI-GeneID:
116753352
NCBI-ProteinID:
XP_032486933
Ensembl:
ENSPSNG00000003385
LinkDB
All DBs
Position
4:61458537..61467468
Genome browser
AA seq
908 aa
AA seq
DB search
MEEGGREKAPLQPQQPPATSPGGGDEKPSGKERRDAGDKDKEQELSEEDKQLQDELEMLV
ERLGEKDTSLYRPALEELRRQIRSSTTSMTSVPKPLKFLRPHYGKLKEIYENMAPGENKR
FAADIISVLAMTMSGERECLKYRLVGSQEELASWGHEYVRHLAGEVAKEWQELDDAEKTQ
REPLLTLVKEIVPYNMAHNAEHEACDLLMEIEQVDMLEKDIDENAYAKVCLYLTSCVNYV
PEPENSALLRCALGVFRKFSRFPEALRLALMLNDMELVEDIFTSCKDVVVQKQMAFMLGR
HGVFLELSEDVEEYEDLTEIMSNVQLNSNFLALARELDIMEPKVPDDIYKTHLENNRFGG
SGSQVDSARMNLASSFVNGFVNAAFGQDKLLTDDGNKWLYKNKDHGMLSAAASLGMILLW
DVDGGLTQIDKYLYSSEDYIKSGALLACGIVNSGVRNECDPALALLSDYVLHNSNTMRLG
SIFGLGLAYAGSNREDVLTLLLPVMGDSKSSMEVAGVTALACGMIAVGSCNGDVTSTILQ
TIMEKSETELKDTYARWLPLGLGLNHLGKGEAIEAILAALEVVSEPFRSFANTLVDVCAY
AGSGNVLKVQQLLHICSEHFDSKEKEEDKDKKEKKDKDKKEAPADMGAHQGVAVLGIALI
AMGEEIGAEMALRTFGHLLRYGEPTLRRAVPLALALISVSNPRLNILDTLSKFSHDADPE
VSYNSIFAMGMVGSGTNNARLAAMLRQLAQYHAKDPNNLFMVRLAQGLTHLGKGTLTLCP
YHSDRQLMSQVAVAGLLTVLVSFLDVRNIILGKSHYVLYGLVAAMQPRMLVTFDEELRPL
PVSVRVGQAVDVVGQAGKPKTITGFQTHTTPVLLAHGERAELATEEFLPVTPILEGFVIL
RKNPNYDL
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atggaggagggtggccgggagaaggcacccctgcagccccagcagcccccagcgacgtcc
cccggtggcggggatgagaagccgagcggcaaggagcggcgggatgccggagacaaggac
aaagagcaggagctgtctgaggaggacaaacaacttcaggatgaactggagatgctcgtg
gaacgactgggggagaaggacacgtccctgtaccgaccagccctggaggaactgaggagg
cagattcgttcttctacaacttccatgacttcagtgcccaagcctctcaaatttctgcgt
ccacactatggcaaactgaaggagatctatgagaacatggcccctggggagaataagcgt
tttgccgctgacatcatctctgttttggccatgaccatgagcggggagcgtgagtgcctc
aaatatcgtctagtgggctcccaggaggaattggcatcatggggtcatgagtacgtcagg
catctggcaggagaagtggctaaggagtggcaggagctggatgatgcagagaagacgcag
cgggagccactgctgaccctggtgaaggagattgtcccctacaacatggcccacaatgca
gagcatgaggcctgcgacctgcttatggaaattgagcaggtggatatgctggagaaagac
attgatgagaatgcatatgcaaaggtctgcctctatctcaccagttgtgtgaattacgtg
cctgagcctgagaactctgccctactgcgttgtgccctgggtgtgttccgaaagttcagt
cgcttccctgaagcactgagattggcattgatgctcaatgacatggagctggtagaagat
attttcacctcctgcaaggacgtggttgtacagaagcaaatggcattcatgctaggccga
catggggtgtttttggagctgagtgaagatgtggaggagtatgaggacctgacagagatc
atgtccaatgtgcagctcaacagcaacttcttggctttagctcgggagctggacatcatg
gaacccaaggtgcctgatgacatctataaaacccacctagagaacaacaggtttgggggc
agtggctctcaggtggactctgcccgcatgaacctggcctcctcttttgtgaacggcttt
gtgaatgcagcctttggccaggacaagctgctgactgatgatggcaacaaatggctttac
aagaataaggatcatggaatgttgagtgcagctgcatcccttggcatgattctgctgtgg
gatgtggatggtggccttactcagattgacaagtacctgtactcttctgaggactatatc
aagtcaggagccctcctggcctgtggcatcgtgaactctggtgtccgaaatgagtgtgac
cctgctctggcactcctctcagactatgtcctccacaacagtaacacaatgagacttggt
tccatctttgggcttggcttggcctatgctggctccaatcgcgaagatgttctaacactg
ctgctacctgtgatgggagattccaagtccagtatggaggtggcaggtgtgacagctcta
gcctgtggaatgatagcggtgggatcctgcaatggcgatgtcacttccactatccttcag
accatcatggagaagtcagagactgagctcaaggacacatatgcccgttggcttcctctt
ggactgggcctcaaccacctagggaagggagaggccattgaggccatcctggccgcactg
gaggttgtgtcagagccattccgcagttttgccaacacactggtggatgtgtgtgcctat
gcaggctctgggaatgtactgaaggtgcagcagctgctccacatttgcagtgaacacttt
gactccaaggaaaaggaggaagacaaagacaaaaaggaaaagaaggacaaggacaagaag
gaagcccctgccgacatgggagcacatcagggagtagctgtgctggggattgcccttatt
gctatgggtgaggagattggtgcagagatggcactacgaacctttggccacctgctgaga
tatggggagcctacactccgaagggctgtgcctttagcactggccttaatctccgtttcc
aatccacgactcaacatcttggataccctaagcaaattctctcatgatgctgacccagaa
gtttcctataactccatctttgccatgggcatggtgggcagtggtaccaataatgcccgt
ctggctgcgatgctgcgccagttagcccagtatcatgccaaggaccccaacaacctcttc
atggtgcgcttggcacagggcctgacccatttagggaagggcacactcaccctctgcccc
taccacagtgaccggcagcttatgagtcaagtggccgtggctgggctgctcaccgtgctt
gtctctttcctggatgtccgcaacatcatcttaggcaagtcgcactatgtattatatggg
ctggtggctgccatgcagccccgaatgctggtcacattcgatgaggagctgcggccatta
ccagtgtctgtccgtgtgggccaggcagtggatgtggtgggccaggccggcaagcccaag
accatcacagggttccagacacacacaaccccagtattgctggctcacggggagcgagca
gaattggccactgaggagttccttcccgtcacccctattctagaaggttttgttatcctt
cggaagaacccaaactatgatctctaa
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