Phocoena sinus (vaquita): 116755539
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Entry
116755539 CDS
T07759
Symbol
SSNA1
Name
(RefSeq) LOW QUALITY PROTEIN: Sjoegren syndrome nuclear autoantigen 1
KO
K16780
sjoegren syndrome nuclear autoantigen 1
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
psiu03036
]
116755539 (SSNA1)
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
psiu03037
]
116755539 (SSNA1)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
116755539 (SSNA1)
Cilium and associated proteins [BR:
psiu03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
116755539 (SSNA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
APG6_N
Bacillus_HBL
PDC10_C
ADIP
KIF21A
GH3
DUF3086
DUF5917
Med11
TMCO5
ERM_helical
CCDC93_CC
UPF0242
ATG17_like
Prominin
DUF7260
DUF724
Herpes_UL6
GAS
DUF4200
Golgin_A5
DUF1664
DUF7605
Mis12
HALZ
Flagellar_rod
HAUS4
Rootletin
DUF3993
FliD_N
Seryl_tRNA_N
ZYG-11_interact
DUF3450
ATAD3_N
FapA
RNase_Y_N
Baculo_PEP_C
TMPIT
DUF948
PRD
Phage_GPO
Radial_spoke_3
S6OS1
Motif
Other DBs
NCBI-GeneID:
116755539
NCBI-ProteinID:
XP_032491033
Ensembl:
ENSPSNG00000000224
UniProt:
A0A8C9ASC8
LinkDB
All DBs
Position
6:complement(683178..684865)
Genome browser
AA seq
119 aa
AA seq
DB search
MTQQGAALQNYNNELVKCIEELCQKREELCRQIQQEEEEKQRLQNEVRQLTEKLARVNEN
LARKIASRNEFDRTIAETEAAYLKILESSQTLLSVLKREAGNLTKVAAPEQRSNGGKDS
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcagggcgcggcgctgcagaactacaacaacgagctggtcaagtgcatcgaa
gagctgtgtcagaagcgggaggagttgtgccggcagatccagcaggaggaggaggagaag
cagcggctgcagaatgaggtgaggcagctgacggagaagctggcccgagtcaacgagaac
ctggctcgcaagatagcctctcggaatgagttcgatcggaccatcgcggagacggaggct
gcctacctcaagatcctggagagctcgcagactctgcttagtgtcttgaagagggaagcg
gggaacctgaccaaggtcgcagcccccgagcagaggagcaacggaggcaaggacagctga
DBGET
integrated database retrieval system
