Phocoena sinus (vaquita): 116756760
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Entry
116756760 CDS
T07759
Symbol
CHRNA1
Name
(RefSeq) acetylcholine receptor subunit alpha
KO
K04803
nicotinic acetylcholine receptor alpha-1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03265
Virion - Ebolavirus, Lyssavirus and Morbillivirus
psiu04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03265 Virion - Ebolavirus, Lyssavirus and Morbillivirus
116756760 (CHRNA1)
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
116756760 (CHRNA1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
psiu04040
]
116756760 (CHRNA1)
Ion channels [BR:
psiu04040
]
Ligand-gated channels
Acetylcholine (nicotinic)
116756760 (CHRNA1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
DUF7536
Claudin_2
Motif
Other DBs
NCBI-GeneID:
116756760
NCBI-ProteinID:
XP_032493565
Ensembl:
ENSPSNG00000006481
UniProt:
A0A8C9BH41
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Position
7:59036570..59051523
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AA seq
457 aa
AA seq
DB search
MEPRPLLLFLGLCSAGLVLGSEHETRLVAKLFENYNSVVRPVEDHRKAVEVTVGLQLIQL
INVDEVNQIVTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWHPDLVLYNNADGDF
AIVKFTKVLLDYTGHITWTPPAIFKSYCEIIVTHFPFDEQNCSMKLGTWTYDGSVVAINP
ESDQPDLSNFMESGEWVIKESRGWKHWVFYACCPSTPYLDITYHFVMQRLPLYFIVNVII
PCLLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPSTSSAVPLIGKYMLF
TMVFVIASIIITVIVINTHHRSPSTHVMPEWVRKVFIDTIPNIMFFSTMKRPSREKQDKK
IFTEDIDISDISGKPGPPPMGFHSPLIKHPEVKSAIEGIKYIAETMKSDQESNNAAEEWK
YVAMVMDHILLGVFMLVCIIGTLAVFAGRLIELNQQG
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atggaaccccggccgctgctgctgttccttggcctctgctcagctggcctcgtcctgggc
tccgaacatgagacccgcctggtggcaaagctatttgaaaactacaacagcgtagtacgg
cccgtggaagaccaccgcaaggccgtggaggtgacggtgggcctgcagctgatacagctc
atcaacgtggatgaagtaaatcagatcgtgacaaccaatgttcgtctgaaacagcaatgg
gtggattacaacttaaaatggaacccagacgactatggtggcgtgaaaaaaattcacatt
ccatcagaaaagatctggcacccggacctagttctttataacaatgcagatggtgacttt
gccattgtcaagttcaccaaagtgctcctggactacactggccacatcacgtggacacct
cccgccatctttaaaagctactgtgagatcatcgtcacccactttccctttgacgagcag
aactgcagcatgaagctgggcacctggacctatgacggatccgtggtggccatcaacccg
gaaagcgaccagccagacctaagcaacttcatggagagtggggaatgggtgatcaaggag
tcccggggctggaagcactgggtgttctacgcctgctgcccctccaccccctacctggac
atcacctaccactttgtcatgcagcgcctgcccctctacttcatcgtcaacgtcatcatt
ccctgcctgctcttctccttcttaaccggcctggtgttctacctgcccacagactcagga
gagaagatgactctcagcatctctgtcctgctgtccttaaccgtgttccttctggtcatt
gtggagctgatcccttccacctccagtgcagtgcccttgattgggaagtacatgctgttc
accatggtgttcgtcatcgcatccatcatcatcaccgtcatcgtcatcaacacacaccac
cgctcccccagcacccacgtcatgcccgagtgggtgcggaaggtttttatcgacactatc
ccaaatatcatgttcttctccacgatgaaaagaccatccagagaaaaacaagacaaaaaa
atttttacagaagacattgatatttctgacatttctgggaagccgggacctccacccatg
ggtttccactctcccctgatcaaacaccccgaggtgaaaagtgccattgagggcatcaaa
tacatcgcagagaccatgaagtcagaccaggagtccaataacgcggccgaggaatggaag
tacgttgcaatggtgatggaccacattctcctcggagtcttcatgctcgtctgcatcatc
ggaacgctggctgtgtttgcaggtcggctcattgaattaaatcagcaagggtga
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