Phocoena sinus (vaquita): 116758267
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Entry
116758267 CDS
T07759
Symbol
SART1
Name
(RefSeq) U4/U6.U5 tri-snRNP-associated protein 1
KO
K11984
U4/U6.U5 tri-snRNP-associated protein 1
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
116758267 (SART1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psiu03041
]
116758267 (SART1)
04121 Ubiquitin system [BR:
psiu04121
]
116758267 (SART1)
Spliceosome [BR:
psiu03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
116758267 (SART1)
Complex C
U4/U6.U5 tri-SnRNP specific factors
116758267 (SART1)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
116758267 (SART1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SART-1
HIND
Dsh_C
HA
Motif
Other DBs
NCBI-GeneID:
116758267
NCBI-ProteinID:
XP_032496998
Ensembl:
ENSPSNG00000012534
LinkDB
All DBs
Position
8:103795880..103811795
Genome browser
AA seq
803 aa
AA seq
DB search
MGSSKKHRGEKEAAGTTAAAGTGGATEQPPRHREHKKHKHRSSGGGSSGSERRKRSRERG
SERGSGRRGAEAEARSGAHGRERNQTEPSERRVKREKREDGYEAAASSKASSGDASSLSI
EETNKLRAKLGLKPLEVNAVKKEAGTKEEPVTADVINPMALRQREELREKLAAAKEKRLL
NQKLGKIKALGEDDPWLDDTAAWIERTRQLQKEKDLAERRAKLLEEMDQEFGVSTLVEEE
FGQRRQALYSARDLQGLTVEHAIDSFQEGETVILTLKDKGVLQEEEDVLVNVSLVDKERA
EKNVELRKKKPGYLPYAEDESVDDLAQQKPRSVLSKYDEELEGERLQSFRLEQGGVADGL
RERELEEIRAKLRLQAQSLSAAGPRLASEYLTPEEMVTFKKTKRRVKKIRKKEKEVVIQA
DDLLPLGDQTQDEDFGSRLRGRGRRRVPQADEEAQEEGEKEPVSQPLQSDDPRVENMDIS
DEEEGRAPWSGSPEVLEEDEAELELQKQLEKGRRLRQLQQLRDSGEKVVEIVRRLECRQR
GWEEEEDPERKGAIVFNATSEFCRTLGEIPTYGLAGNREEQEELMDFERDEERSANGGSE
SDGEENIGWSTVNLDEEKQQQDFSASSTTILDEEPIVNRGLAAALLLCQNKGLLETTVQK
VARVKAPNKSLPSAVYCIEDKMAIDDKYSRREEYRGFTQDFKEKDGYKPDVKIEYVDETG
RKLTPKEAFRQLSHRFHGKGSGKMKTERRMKKLDEEALLKKMSSSDTPLGTVALLQEKQK
AQKTPYIVLSGSGKSMNANTITK
NT seq
2412 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgtcaaagaagcaccgtggggagaaggaggcggccgggaccacggcagcggcc
ggcaccgggggcgccaccgagcagccgcctcggcaccgggaacacaaaaaacacaagcac
cggagcagcggcggcggcagcagtggcagcgaacgacggaagcgaagccgagagcgtggg
agcgaacgcgggagcgggcgacgcggggccgaagctgaggcccgcagcggcgcgcacggg
cgggagcgcaaccagacagagccctccgagcggcgggtgaagcgggagaagcgggaggac
ggctacgaggccgctgccagctccaaagcaagctcaggtgatgcctcgtcactcagcatc
gaggagaccaataaactccgggcaaagttggggttgaaacccttggaggtcaatgccgtc
aagaaggaggcgggcaccaaggaggagcccgtgaccgccgatgtcatcaatcccatggcc
ttgcgacagcgagaagagctacgagagaagctggcggctgccaaagaaaagcgtctcctg
aaccaaaagctggggaagataaaggccctgggggaggatgacccctggctggatgacact
gcagcctggatcgagaggacccggcagcttcagaaggagaaggacttggcagagaggagg
gccaagctgctggaggagatggaccaagagtttggtgtcagcaccctggtggaggaggag
tttgggcagaggcggcaggccctgtacagtgcccgggacctgcagggcctcaccgtggag
catgccattgactcattccaagagggggagactgtcatcctcaccctcaaggacaaagga
gtgctgcaggaggaggaggatgtgctggtgaacgtgagcctggtggataaggagcgggca
gagaagaacgtggagctgcgcaagaagaagcctggctacctgccgtacgcagaggatgag
agtgtggatgacttggcacagcaaaaaccccgctctgtcctgtccaagtacgatgaggag
ctcgagggcgagcggctgcagtccttccgtctggagcagggcggcgtggccgatggcctc
cgggaacgggagctggaagagatccgggccaagctgcggctgcaggctcagtccttgagc
gcagccgggccccggctcgcctccgagtacctcacgcccgaggagatggtgacctttaaa
aagaccaagcggcgagtgaagaagatccgcaagaaggagaaggaggtggtgatacaggct
gatgacctgctgccccttggggaccagactcaagatgaggacttcggttccagattgcgg
ggccggggtcggcgccgagtgcctcaggcagacgaggaggcccaggaggagggggagaag
gagcctgtgtctcagcccttgcagtcagatgacccccgcgtggagaacatggacatcagc
gacgaggaggagggcagagcaccgtggtctgggtcacccgaggtgctggaggaggatgag
gcggagctggagctgcagaaacagctggagaaggggcgccgcctgcggcagctacagcag
ctgcgagacagcggtgagaaggtggtggagatcgtcaggaggctggagtgtcgccagcgg
ggctgggaggaggaggaggatccggagcggaagggggccatcgtgttcaacgccacgtcg
gagttctgccgcacgctgggggagatccccacctacgggctggccggcaaccgggaggag
caggaagagctcatggactttgaacgggatgaggagcgatcggccaacggcggctccgaa
tctgacggggaggagaacattggctggagcacagtcaacctggatgaggagaagcagcag
caagatttctccgcctcctccaccaccatcctggacgaggagcccatcgtgaatagaggg
ctggcagccgccctgctcctgtgtcagaacaaagggctgctggagacaacggtgcagaag
gtggcccgggtgaaggcgcccaacaagtccctgccgtcagccgtgtactgcatcgaggac
aagatggccatcgatgacaagtacagccggcgggaggagtaccgaggcttcacccaggac
ttcaaggagaaggacggctacaagcctgacgtcaagatagagtacgtggacgagacgggc
cggaaactcactcccaaggaggctttccggcagctgtcccaccgcttccatgggaagggc
tcgggcaagatgaagacggagcggcggatgaagaagctggacgaggaggcgctcctgaag
aagatgagctccagcgacacgcccctgggcaccgtggctttgctccaggagaagcagaag
gcccagaagacaccgtacatcgtgctcagcggcagtggcaagagcatgaacgcgaacacc
attaccaagtga
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integrated database retrieval system
