Phocoena sinus (vaquita): 116759509
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Entry
116759509 CDS
T07759
Symbol
NUP205
Name
(RefSeq) nuclear pore complex protein Nup205 isoform X1
KO
K14310
nuclear pore complex protein Nup205
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu03013
Nucleocytoplasmic transport
psiu05014
Amyotrophic lateral sclerosis
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
116759509 (NUP205)
09160 Human Diseases
09164 Neurodegenerative disease
05014 Amyotrophic lateral sclerosis
116759509 (NUP205)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psiu03019
]
116759509 (NUP205)
03036 Chromosome and associated proteins [BR:
psiu03036
]
116759509 (NUP205)
Messenger RNA biogenesis [BR:
psiu03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
116759509 (NUP205)
Chromosome and associated proteins [BR:
psiu03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
116759509 (NUP205)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup192
Motif
Other DBs
NCBI-GeneID:
116759509
NCBI-ProteinID:
XP_032499243
Ensembl:
ENSPSNG00000021013
LinkDB
All DBs
Position
9:complement(17578593..17660358)
Genome browser
AA seq
2012 aa
AA seq
DB search
MATLLAVNSAASLWGPYKDIWQTVGNALWRRQPEAVHLLDMILKKHKPDFISLFRNPPRN
VQQHEKVQKASTEGVAIQGQQGTRLLPEQLIKEAFILSDLFDIGELAAVELLLAGEHQQP
HFPGLTRGLVAVLLYWDGKRCIANSLKALIQSRRGKTWTLELSPELVSMTTRFTDELMEQ
GLTYKVLTLVSQIDVNNEFEKLQRERGLGSEKHRKEVSDLIKECRQSLAESLFAWACQSP
LGKDDTLLLIGHLERVTVEANGSLDAVNLALLMALLYCFDISFIEQSTEERDDMIHQLPL
LTERQYIATIHSRLQDSQPWKLPGLQATVRLAWALALRGISQLPDVTALAEFTEADEAMA
ELAIADSVFLFLTESVVVSENFYQEEFYIRRIHNLITDFLALMPMKVKQLRNRADEDARM
IHMSMQMGNEPPISLRRDLEQLMLLIGELYKKNPFNLELALEYWCPSEPLQTSTILGSYL
GVAHQRPPQRQVVLSKFVRQMGDLLPPTIYIPYLKMLQGLANGPQCAHYCFSLLKVNGSS
HVENIQGAGGSPVSWEHFFHSLMLYHEHLRKDLPSADSVQYRHLPSRGITQKEQDGLIAF
LQLTSTIITWSENARLALCEHPQWTPVVVILGLLQCSIPPVLKAELLKTLAAFGKSPEIA
ASLWQSLEYTQVLQTVRVPSQRQAIGIEVELNEIESRCEEYPLTRAFCQLISTLVESSFP
SNLGAGLRPPGFDPYLQFLRDSVFLRFRTRAYRRAAEKWEVAEVVLAVFYKLLGDYEPQL
EDFVDQFVELQGEEIIAYKPPGFSLMYHLLNESPMLELALSLLEEGVKQLDTYAPFPGKK
HLEKAVQHCLALLNLTLQKENLFMDLLRESQLALIVCPLEQLLQGINPRTKKADNVVNIA
RYLYHGNTNPELAFESAKILCCISCNSNIQIKLVGDFTHDQSVSQKLMAGFVECLDSEDT
EEFVRLEEGSELEKKLAGIRHETRIHILNLLITSLERNPPNLALYLLGFELKKPVSTTNL
QDPGVLGCPRTCLHAILNILEKGTEGRTGPVAVRESPQLAELCYQVIYQLCACSDTSGPT
MRYLRTSQDFLFSQLQHLPFSNKEYEISMLNQMSWLMKTASIELRVTSLNRQRSHTQRLL
HLLLDDMPVKPYSDGEGGIEDENRSVSGFLHFDTTTKVRRKILSILDSIDFSQEIPEPLQ
LDFFDRAQIEQVIANCEHKNLRGQTVCNVKLLHRVLVAEVNALQGMAAIGQRPLLMEEIS
TILQYVVGRNKLLQCLHAKRHALESWRQLVEIILTACPQDLIQAEDRQLIIRDILQDVHD
KILDDEAAQELMPVVAGAVFTLTAHLSQAVRTEQKQPVVLGPGEAHYAFVLDNSFTSPPP
AENAVVGFASIGDSSLHIILKKLLDFILKTGGGFQRVRTHLYGSLLYYLQIAQRPDEPDT
LEAAKKTMWERLTAPEDVFSKLQRENIAIIESYGAALMEVVCRDACDGHEIGRMLALALL
DRIVSVDKQQQWLLYLSNSGYLKVLVDSLVEDDRTLQSLLTPQPPLLKALYTYESKMAFL
TRVAKIQQGALELLRSGVIVRLAQCQVYDMRPEMDPQGMFGLRDAPVFIPTPVDRYRQIL
LPALRLCQVILTSSMAQHLQAAGQVLQFLISHSDTIQAILRCQDVSAGSLQELALLTGII
SKAALPGILSELDVDVNEGSLMELQGHIGRFQRQCLGLLSRFGGSDRLRQFKFQDDNVEG
DRVSKKDEIELAMQQICANVMEYCQSLMLQSSPTFQHAVCLFTPSLSETINRDGPRQDTQ
APVVPYWRLPGLGIIVYLLKQSANDFFSYYDSHRRSVNKLQNVEQLPPDEIKELCQSVMP
AGVDKISTTQKYVLARRRLVKLINNRAKLLSLCSFITETCLFILWRHLEYYLLHCTPTDS
QDSLFASRTLFKSRRLQDSFASESNLDFRSGLTIVSQHDIDQLQADAISAFGESLQKKLL
DIEGLYSKVRSRYSFIQALVRRIRGLLRISRN
NT seq
6039 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgctgttggcggtaaattcggctgctagtctgtggggtccttacaaagacatt
tggcagactgtgggaaatgctctttggagaagacaacctgaagctgttcaccttcttgac
atgattttgaagaaacacaaacctgacttcatctcattgttcagaaacccacccagaaat
gttcaacaacatgagaaggttcagaaagccagtacagaaggagttgctatccagggtcaa
cagggaacccgacttcttcctgaacagcttattaaagaagcctttatcctcagtgacctt
tttgatattggtgaattggcagctgttgagcttctccttgctggagagcaccagcaacca
cattttcctggcctcaccagaggcttagtagctgttcttttatactgggatggaaagcgg
tgcattgcaaattccctgaaagccttgatacagtctcgacgaggaaagacatggaccctc
gaactcagtccagagctggtttccatgacaacacggtttactgatgagctgatggagcaa
ggattgacttacaaagttcttactcttgtgtcacagattgatgttaacaacgagtttgag
aaactacagcgtgagagaggtttaggcagtgaaaaacatcgaaaagaggtttctgatctc
atcaaggagtgcaggcagtctctggcagaaagcctttttgcctgggcttgccaatcacct
ttaggcaaagatgacactctgctccttattggacatttggaaagagtgactgttgaggct
aatggctcgttggatgcagtgaatctggctcttcttatggcacttctgtactgctttgat
atcagttttatagaacaaagcacagaggaacgtgatgatatgattcatcaacttccactg
ttgacagagagacaatacattgcaacaattcactctcgtcttcaagactcacagccttgg
aaactgccgggtctgcaagccactgtgagacttgcctgggcactggcgttgagggggata
tctcagctccctgatgtgacagctctggctgaattcacagaagcagatgaagcaatggca
gagcttgcaattgcagacagtgttttcctgttcctcactgaatccgtagtggtgtcagaa
aacttctatcaggaggaattttatattcgtagaatccataatctcattacagatttcctg
gcacttatgccaatgaaggtgaagcagttgaggaatcgggcagatgaagatgctcgaatg
attcacatgagtatgcagatgggcaacgaaccccccatttcacttagaagggatctggaa
caattaatgctcttgataggtgagctatataaaaagaatccttttaatttggagcttgca
ctagaatactggtgtccctcagagcctcttcagacttccactatcctgggttcttacctt
ggggtggctcatcagcgaccccctcagcgccaggttgtcttgtcaaagtttgttaggcaa
atgggtgacctgttgcctccaactatttatattccttatttgaaaatgctccagggattg
gctaatgggccccagtgtgcccactactgttttagtctactcaaagtcaacggtagcagt
cacgttgaaaatattcagggggcaggcggcagtcctgtttcctgggaacatttctttcac
tccttgatgctttaccatgaacacctccggaaggatcttccgagtgcagatagtgtccag
taccgtcaccttccttcacgtggcatcacccagaaggagcaggacgggttgattgctttt
ttacagctcacatctaccatcattacttggagtgaaaatgctcgtttggcactctgtgaa
catcctcagtggacccccgtggtggtgattctgggactcctgcaatgcagtatccctcct
gtattaaaggccgaactactgaagacacttgcagcgtttggaaaatctcctgaaattgct
gcttctctctggcagtcgttggaatacactcaggtactgcaaaccgtaagagttccaagc
cagaggcaagctattggtattgaggtggaactaaatgagatagaatcccgatgtgaagaa
tacccattaactcgtgccttttgccagctaattagtaccctggtggagagctcctttcct
tctaatttgggcgctggactgcggcctcccggctttgacccttatttgcagttccttaga
gattctgtgtttctccgattccgtacaagagcttaccggagagcagctgaaaagtgggaa
gtcgctgaggttgttttggcggtgttttataaattgctcggagactatgaacctcaactt
gaagattttgtagaccagtttgtggaactacaaggagaagaaatcatagcctataagcca
ccaggatttagtctgatgtatcatcttctgaatgagtcaccaatgttggagcttgctctt
agtttactggaggaaggcgttaagcagcttgatacctatgctcctttccctgggaagaaa
cacctggagaaagcagtgcaacattgccttgcacttctcaatcttactctgcaaaaggaa
aacctctttatggatcttctaagagagagtcagctggctctaatagtctgtcctttagaa
cagctattgcagggaatcaatcccagaactaagaaggctgataatgtggtgaacattgcc
agatacctatatcatggcaatactaatccagaattggcttttgaaagtgccaagatcctc
tgctgtatctcttgcaattccaatattcagataaaattggttggagatttcacacatgac
cagagtgtaagtcagaagctgatggctggatttgtggagtgtttggatagtgaagataca
gaagaatttgtacgtctagaagagggatcagaacttgaaaagaaattagctggaatccgt
catgaaacaagaatccacatcttgaatcttctcatcacctctttggaacgcaatccacca
aatcttgctctctacctattgggctttgaattgaagaaacctgtcagtaccacaaaccta
caagacccaggagtgttaggttgccctcggacctgccttcatgccatcttaaacatcttg
gagaagggaactgaagggagaacaggcccggtggcagtgagagaatctcctcaactcgct
gagctgtgttaccaggtgatatatcagttatgtgcatgctctgatacatctggtcctact
atgagatacttgagaaccagccaggacttcttattttctcagttgcaacatttaccattt
tctaacaaagaatatgaaatatctatgctgaaccaaatgtcatggctgatgaagactgcc
tcgatagaactaagggtgacttctctgaatcgccaacggtcacacacccagaggctcctt
cacctcctactggatgacatgccagtgaaaccctactcagatggggaaggaggaatagaa
gatgaaaatcggtctgtctctgggttcctgcactttgatactactacaaaagtacgtcga
aaaattctcagtattctcgactccattgacttcagtcaggagatccccgagcctttgcaa
ttggatttctttgatcgggcccagattgaacaagttattgctaactgtgaacacaagaat
ttacggggacagacagtctgcaatgtcaagcttcttcatagagttcttgtagccgaagta
aatgcccttcagggtatggcagccataggacagagacctctactaatggaggaaatcagc
actatacttcagtacgtggtaggaagaaacaaattgttgcagtgtcttcatgcaaaacgg
catgctctggagtcatggaggcagctggtagaaattatactgacagcttgccctcaggac
ctcattcaggcagaggatcgacagctgattattcgtgatattttacaagatgtgcatgat
aagatactggatgatgaagcagcacaggagttaatgccagtggtagcaggtgctgtgttc
accctgaccgctcacctaagccaagccgttcgcacagaacagaagcaaccagtagtcttg
ggacccggagaggctcattatgcttttgtgcttgataactctttcacctcacctccgcct
gcagagaatgcagtggtggggtttgcttctattggagattcttcacttcatatcatattg
aagaaactgttagacttcattttgaagacaggtggcggattccagcgagtgaggacacac
ctgtatggctctctgctttattacttacagattgcccagagaccggatgaaccagacacc
ttagaagcagccaagaaaaccatgtgggaaaggctgaccgcccctgaagatgtgtttagt
aaattacagcgagaaaacatagccatcattgagagctatggtgctgccctcatggaagtg
gtctgtcgagatgcttgtgatggtcatgagattggaaggatgctggcactggctctactt
gatcggattgtctccgtagataagcagcagcagtggcttctgtatctttctaacagtggc
tatttgaaggtgcttgtggacagcttggtagaagatgaccgtactttgcagagcttactc
actccacagcctccccttttaaaagccctttatacatacgaatccaaaatggcatttctc
acaagagtggccaagatacaacagggcgctttagagctgctgaggtctggggtgattgtg
aggctggcacaatgccaagtctatgacatgcgcccagaaatggacccacagggcatgttt
ggcctgagagatgccccagtgttcatccctactccagtggaccgataccgccagattctg
cttccagctcttcgcttgtgccaggtcatcctcacgtctagtatggcccagcacttgcag
gcagcagggcaggtgttgcagtttctcatttctcattctgacaccatacaagcaatcctg
cgctgtcaggatgttagtgctgggtctttgcaggaattggctctgctgacaggaattata
agtaaagcagcacttcctggtatactaagtgaacttgatgttgatgttaatgaaggatct
ctaatggagctacaaggacatattggaagattccagcgccagtgcttaggactactaagt
cgctttggtggctccgacagactgcgtcagtttaaatttcaagatgataatgtggaggga
gatagagtgagcaagaaagatgagatcgaactggctatgcagcagatttgtgccaatgtc
atggaatattgccagtcactcatgttacagagttcccctacctttcagcatgctgtgtgt
ctcttcacccctagcctgtcagaaaccattaatagagatgggccccggcaagatacccaa
gctccagtggttccatactggcgcctacctggtttgggcattattgtctacctgctgaaa
cagagcgctaatgatttcttcagctattatgacagtcatcgacggagtgtcaacaagcta
cagaacgtggagcaacttcccccagatgagataaaagagttgtgtcagtctgtgatgcct
gctggtgttgataaaatctccactacccagaaatatgttctagcaagacgccgtttggtg
aagctgatcaacaatcgagctaaactgctttccctttgttcttttatcacagagacctgc
ctgtttattctctggcgccatctggagtactacttgttacattgcacacccacggattct
caagactccttatttgcctccaggaccttatttaaaagcagaaggctacaagattccttc
gcttcagaaagcaatctggattttagaagtgggctgactatagtgagccaacatgatata
gaccagcttcaggctgatgccatcagtgcttttggagaatcactacaaaagaaacttctg
gacattgaaggattgtattcaaaagttcgatctcgctatagtttcatacaagctcttgtc
agacgtatccgaggcttgctgaggatatcacggaactga
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integrated database retrieval system
