Phocoena sinus (vaquita): 116760925
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Entry
116760925 CDS
T07759
Symbol
TMTC1
Name
(RefSeq) protein O-mannosyl-transferase TMTC1 isoform X1
KO
K23424
protein O-mannosyl-transferase [EC:2.4.1.-]
Organism
psiu
Phocoena sinus (vaquita)
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
psiu01003
]
116760925 (TMTC1)
Glycosyltransferases [BR:
psiu01003
]
O-Glycan biosynthesis
O-linked Man type
116760925 (TMTC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_11
TPR_16
TPR_14
TPR_12
TPR_19
TPR_17
TMTC_DUF1736
TPR_7
TPR_10
TPR_CcmH_CycH
TPR_15
TPR_9
TPR_Slam
ANAPC3
ARM_TT21_C
TPR_MalT
FAT
HAT_PRP39_C
ARM_TT21_4th
TPR-S
TPR_5
ARM_TT21_N
NatA_aux_su
TPR_NPHP3
HAT_Syf1_CNRKL1_C
HAT_PRP39_N
ARM_TT21_5th
TPR_3
ChAPs
Mad3_BUB1_I
Suf
ARM_TT21_2nd
BTAD
RNPP_C
Alkyl_sulf_dimr
Motif
Other DBs
NCBI-GeneID:
116760925
NCBI-ProteinID:
XP_032502355
Ensembl:
ENSPSNG00000005916
UniProt:
A0A8C9BJX5
LinkDB
All DBs
Position
10:78308868..78573448
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AA seq
944 aa
AA seq
DB search
MVVTSSARGGGGDRAPSRRRGCGLSAPGAAALLVGASCLCYGRSLQGEFVHDDVWAIVNN
PDVRPGAPLRWGIFSNDFWGKGMAENTSHKSYRPLCVLTFKLNIFLTGMNPFYFHAVNVI
LHCLVTLVLMYTCDKTVFKNRGLAFVTALLFAVHPVHTEAVAGIVGRADVLACLLFLLAF
LSYSRSVDQCCVGECFPPTASPFFLLLSLFLGTCAMLVKETGITVFGVCLVYDLFSLSHN
HDKSSNGVVHQRSLQRPGSSLPTAPPAHPLRENGKQQRFPHKGAWGGCHTPLPPEPKSSG
FPVSPRAVWSLMRYLTASRNRNFLLTMRPFLKRAILVISYVIVVLYFRLWIMGGSMPLFS
EQDNPASFSPYILTRFLTYSYLLAFNVWLLLAPVTLCYDWQVGSIPLVETIWDTRNLATI
LLAVVMALLSLHCLAAVKRLEHREVLVGLLFLVFPFIPASNLFFRVGFVVAERVLYMPSM
GYCILFVHGMNKLCTWLNRCGAATLSVSTVLLLLLFSWKTMKQNEIWLSRESLFRSGVQT
LPHNAKVHYNYANFLKDQGRNREAIYHYRTALKLYPRHASALNNLGTLTTDTAEAKMYYQ
RALQLNPQHNRALFNLGNLLRSQEKKEEAIILLKDSIKYGPEFADAYSSLASLLAEQERF
KEAEEIYQAGIKNCPDSSDLHNNYGVFLVDTGSPEKAVTHYQQAIRLSPSHQVAMVNLGR
LYRSLGDNSVAEEWYKRALQVTRKAEILSPLGALYYNTGRYEEALQIYREAASLQPSQRE
LRLALAQVLAVMGQTKEAEKMTNHIVSEETGCLECYRLLSAIHSKQEQHDKALDAIDKAL
KLKPKDPKVVSELFFTKGNQLREQNLLDKAFESYKVAVELNPDQAQAWMNMGGIQHIKGN
YVSARAYYERALQLVPDSKLLQENLAKLDRLEKRLQEVREKDQM
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggtagtgacaagctctgcccgaggcggcggcggggaccgcgcgccctccaggcggcgg
ggctgcggactttcggcgcctggggccgcggcgctgctggtcggggcgagctgcctgtgc
tacggccgctccctgcagggcgagttcgtgcacgacgacgtgtgggcgatcgtcaacaac
cccgacgtgcggcccggcgccccgctgcgctggggcatcttctccaacgacttctggggc
aagggcatggccgagaacaccagccacaagtcctaccggccgctctgcgtcctcaccttc
aagctaaacatctttttgactggcatgaacccattctactttcatgcagtaaatgtcatt
ttacactgcctagtgacccttgtgctgatgtacacctgtgacaaaactgtcttcaagaat
cgtggacttgctttcgttacggcattgctttttgctgtgcatcctgttcacacagaggcg
gtggccggaattgttggcagagctgacgtgttggcatgcttgctgtttctgttagccttt
ctctcctacagtaggagtgtggaccagtgttgtgttggggaatgtttccctcccacggct
tctcccttcttcctgctactcagtctgtttctggggacctgcgcgatgctggtgaaagag
acaggcatcacggtgttcggcgtgtgcttggtttatgatctcttttctttatcccacaat
catgataaatcgagcaatggggtcgtccatcagcgcagcctacagcggcctgggagctcc
ctgcccaccgcaccaccagcgcaccctctccgggagaatgggaagcagcagcggttccct
cacaaaggagcttggggtggctgccatactccattgccacctgaacccaagagcagtgga
ttccctgtgtctcctcgagctgtgtggtccttgatgaggtatctgacagcaagccgcaat
agaaatttcttgcttaccatgaggccattcttaaaaagggccattttggtcataagttat
gtgattgttgttctgtacttccgtctgtggataatgggaggatctatgcccctcttttca
gagcaggataatccagcttcattttcaccttacattcttacaagattccttacctattcc
tacctcttggccttcaacgtgtggcttctgcttgcacctgttaccctgtgctatgactgg
caggtgggcagtattcctctggtagagaccatatgggacacgcggaacttagccaccatc
cttctggcagttgtgatggccttactgagccttcattgtttagcagccgtcaagagattg
gagcacagggaagttttggtgggcttgttgttcctggttttcccgttcatcccagccagc
aacctcttcttcagggtgggtttcgtggtggccgagagagtgctatacatgcctagcatg
ggctactgcatccttttcgtgcatggaatgaacaagctgtgcacgtggctgaatcgctgt
ggggctgccaccctgagcgtgtccactgtgctgctgctgctgcttttctcctggaaaacc
atgaaacagaatgaaatctggctgtcgagagagtccctattcaggtctggagttcagact
ctgccccacaatgccaaggttcactacaactacgccaatttcctgaaggaccagggtcgg
aacagggaagccatctaccactacagaacggccctcaagttgtatccgcgccatgcaagt
gccctgaacaaccttggaacgctgaccacagacacagcagaggcaaagatgtactatcag
agggctctccagctaaatccacagcacaaccgggctcttttcaatcttgggaatctcctt
aggtctcaggagaaaaaggaagaggctatcatcttactgaaagattccattaaatatggt
cccgagtttgcagatgcatattcaagcttagcttcattactggctgagcaggagaggttt
aaggaagctgaggaaatataccaagctggaataaagaactgcccagatagctcagactta
cacaacaactatggagttttcctagttgatactggctctccagagaaggcagtgacccat
taccaacaggccatcagacttagcccgagccatcaagtagccatggtgaacctggggaga
ctctacaggtcactgggagacaacagtgtggctgaagaatggtacaaacgcgccttgcag
gtgacacgcaaagctgagatattatcaccgctgggagctctatattacaacactggcaga
tatgaagaggctttgcagatttaccgggaagctgcatcccttcagccttcccaaagggaa
ctccgcctggcactggctcaggtcttggccgtgatgggtcagacaaaagaagctgaaaag
atgaccaatcacattgtgtcagaggagactgggtgccttgaatgctatcgcctgttgtct
gccatccacagcaagcaggagcagcacgacaaggcacttgatgctatagacaaggctctg
aagctgaaaccaaaggacccaaaagttgtatctgaactttttttcacaaaaggaaatcaa
ctaagagagcagaaccttcttgacaaagcttttgagagctataaagtggccgtggaacta
aatccagatcaagcacaggcctggatgaacatgggtggaatccagcacatcaagggaaac
tacgtgtctgcaagagcttattatgagagagccttacagctggttccagacagcaaactg
ctgcaggaaaatcttgccaaattggatcgtctagaaaaaagattacaagaagttcgagaa
aaggatcaaatgtag
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