Phocoena sinus (vaquita): 116762025
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Entry
116762025 CDS
T07759
Symbol
VHL
Name
(RefSeq) von Hippel-Lindau disease tumor suppressor
KO
K03871
von Hippel-Lindau disease tumor supressor
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04066
HIF-1 signaling pathway
psiu04120
Ubiquitin mediated proteolysis
psiu05200
Pathways in cancer
psiu05211
Renal cell carcinoma
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
116762025 (VHL)
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
116762025 (VHL)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
116762025 (VHL)
09162 Cancer: specific types
05211 Renal cell carcinoma
116762025 (VHL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
psiu04121
]
116762025 (VHL)
Ubiquitin system [BR:
psiu04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul2 complex
Target recognizing subunit
116762025 (VHL)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHL
VHL_C
Pentapeptide
Motif
Other DBs
NCBI-GeneID:
116762025
NCBI-ProteinID:
XP_032504566
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Position
11:complement(6794988..6801209)
Genome browser
AA seq
217 aa
AA seq
DB search
MPARAGNAEEAETGAEEADAEEADAEEADAEEADAEEADAEEADEPGSQQEMEAGRPRPM
LRSVNTREPSQVIFCNRSPRVVLPVWLNFDGEPQPYPTLPPGTGRRIHSYRGHLWLFRDA
GTSDGLLVNQTELFVPSLNVDGQPIFANITLPVYTLKERCLQVVRSLVKPEDYRRLDIAR
SLYEDLEDHPNVWKDLERLTQEHIENQRMTEETENFN
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcgagggcggggaacgcggaagaggcagagaccggcgcggaggaggcggacgcg
gaggaggcggacgcggaggaggcggacgcggaggaggcggacgcggaggaggcggacgcg
gaggaggcggacgagcccggctcccagcaggagatggaggctgggcggccgcggccgatg
ctgcgctcagtgaacactcgcgagccgtcccaggtcatcttctgtaaccgcagcccgcgc
gtggtgctgcccgtgtggctcaacttcgacggcgagccgcagccctacccgacgctgcca
cccggcacgggacgccgcatccatagctaccgaggtcatctttggctctttcgagatgct
gggacatctgatgggctcctagttaaccagactgagctgtttgtgccgtctctcaatgtt
gatggacagcctatttttgcaaacatcacactgccagtgtacaccctgaaagagcggtgc
ctccaggttgtgcgaagcctagtcaagcctgaggattacaggagactggacatcgcgaga
tccctctacgaagatttggaagaccacccaaatgtgtggaaggacctggagcggttgacc
caggagcatattgaaaatcagcggatgacagaggagactgaaaattttaattga
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