Phocoena sinus (vaquita): 116762239
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Entry
116762239 CDS
T07759
Symbol
SLC6A11
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 3
KO
K05044
solute carrier family 6 (neurotransmitter transporter, GABA) member 11
Organism
psiu
Phocoena sinus (vaquita)
Pathway
psiu04082
Neuroactive ligand signaling
psiu04721
Synaptic vesicle cycle
psiu04727
GABAergic synapse
Brite
KEGG Orthology (KO) [BR:
psiu00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
116762239 (SLC6A11)
09150 Organismal Systems
09156 Nervous system
04727 GABAergic synapse
116762239 (SLC6A11)
04721 Synaptic vesicle cycle
116762239 (SLC6A11)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
psiu02000
]
116762239 (SLC6A11)
Transporters [BR:
psiu02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
116762239 (SLC6A11)
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Gene cluster
GFIT
Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
116762239
NCBI-ProteinID:
XP_032504899
Ensembl:
ENSPSNG00000013275
UniProt:
A0A8C9E523
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Position
11:complement(6033926..6154096)
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AA seq
632 aa
AA seq
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MTAEKALPLGNGKAAEEARESEVLGSGGGSGGAASARDPRDKRDKAVHERGHWNNKVEFV
LSVAGEIIGLGNVWRFPYLCYKNGGGAFLIPYVVFFICCGIPVFFLETALGQFTSEGGIT
CWRKVCPLFEGIGYATQVIEAHLNVYYIIILAWAIFYLSNCFTTELPWATCGHEWNTENC
VEFQKLNTTNHSHVSLQNATSPVMEFWERRVLAISDGIEHVGNLRWELALCLLAAWTICY
FCIWKGTKSTGKVVYVTATFPYVMLLILLIRGVTLPGASEGIKFYLYPDLSRLSDPQVWV
DAGTQIFFSYAICLGCLTALGSYNDYNNNCYRDCIMLCCLNSGTSFIAGFAIFSVLGFMA
YEQGVPIAEVAESGPGLAFIAYPKAVTMIPLSPLWATLFFTMLIFLGLDSQFVCVESLVT
AVVDMYPKVFRRGYRRELLILALSVTSYFLGLVMLTEGGMYIFQLFDAYAASGMCLLFVA
VFECICIGWVYGSDRFYDNIEDMIGYRPLSLIQWCWKVVTPGICAGIFIFFLVKYKPLKY
NNIYTYPAWGYGIGWLMALSSMLCIPLWVFIKVWKTEGTLPEKFQKLTTPSADLSTRGKL
GAGPRTVMVNDCDAKLKGDGTIAAITEKETHF
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgacggcggagaaggcgctgcctctgggcaacgggaaggctgccgaggaggcgcgggag
tctgaggtgctgggtagcggcggcggcagcgggggcgcggcgtccgcccgcgacccgcgc
gacaagcgcgacaaggcagtccacgagcgcggccactggaataacaaggtggagttcgtg
ctgagcgtggcaggggaaatcatcgggctgggcaacgtgtggcgcttcccttacctgtgc
tacaagaacggcggaggggcattcctgattccctatgtggtgttttttatatgctgtggg
attcctgtttttttcctggaaacagctctgggacaatttacgagtgaaggtggcattacg
tgttggaggaaagtgtgccctttatttgaaggcattggctatgcaacgcaggtgattgag
gcccatctaaacgtgtactacatcatcatcctggcgtgggccattttctacctgagcaac
tgcttcaccaccgagctcccctgggccacctgtgggcacgaatggaacacagagaactgc
gtggagttccagaaactgaacacaaccaaccacagccatgtgtccctacagaatgccacc
tctcccgtcatggagttttgggagcgccgggtcctggccatctcagatgggatcgagcat
gttgggaaccttcgctgggagctggccttgtgtctgctggcagcctggaccatctgttac
ttctgcatctggaaggggaccaagtccacaggaaaagtggtgtatgtcaccgcgacgttc
ccctacgtcatgctgctgatccttctgatccggggggtcacgttgcccggggcctccgaa
ggcatcaagttctacctataccccgacctctcccggctctccgacccacaggtctgggta
gatgctgggacgcagatctttttctcctatgccatctgcctgggttgtctgactgctctg
ggaagttataacgattataacaacaactgctacagggactgcatcatgctttgttgcctg
aacagcggcaccagcttcatagccggctttgccatcttctcagtcctgggattcatggca
tatgagcaaggggtgcccatcgccgaggtagcagagtcaggccccggcctggcctttatc
gcttaccccaaggccgtcaccatgattcccctctccccactgtgggccaccttgttcttc
acgatgctcatcttcctgggcctggacagccagtttgtgtgtgtggaaagcctggtgacc
gctgtggtagacatgtaccccaaagtcttccggaggggctatcggcgggagctgctcatc
ctggccctgtcagtcacctcctattttctgggcctcgtgatgttaacggagggtggcatg
tacatcttccagctctttgacgcctacgccgccagtgggatgtgccttctctttgtggcc
gtctttgaatgcatctgcatcggctgggtgtacggaagcgaccgcttctatgataacatc
gaagacatgattggctaccggccgttgtcactcatccaatggtgctggaaagtcgtgacc
cccgggatctgtgcgggcatcttcatcttcttcctggtcaagtacaagcccctcaagtac
aacaacatctacacctaccccgcctggggctatggcattggctggctcatggccctgtcc
tccatgctctgcatcccgctctgggtcttcatcaaggtgtggaagacggaggggacgctg
ccggagaaattccagaagttgacgacccccagcgccgatctgagcacgcggggcaagctt
ggggcaggcccacggacggtgatggttaatgactgtgacgccaaactcaagggtgatggg
accattgcggctatcacagagaaggagacgcacttctga
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