Pseudoalteromonas sp. KAN5: KAN5_04780
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Entry
KAN5_04780 CDS
T10721
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pska Pseudoalteromonas sp. KAN5
Pathway
pska02024
Quorum sensing
pska03060
Protein export
pska03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pska00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
KAN5_04780 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
KAN5_04780 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KAN5_04780 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pska02044
]
KAN5_04780 (ffh)
Enzymes [BR:
pska01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
KAN5_04780 (ffh)
Secretion system [BR:
pska02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
KAN5_04780 (ffh)
Eukaryotic Sec-SRP protein
KAN5_04780 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_22
CbiA
cobW
AAA_33
KTI12
YqeC
AAA_26
APS_kinase
ATP_bind_1
AAA_31
AAA_24
TsaE
AAA_16
AAA_14
FliD_C
ABC_tran
SpoU_sub_bind_like
AAA_30
Thymidylate_kin
Helicase_RecD
cas_Cpf1_2nd
PRP9_N
Motif
Other DBs
NCBI-ProteinID:
BDF93640
LinkDB
All DBs
Position
560663..562042
Genome browser
AA seq
459 aa
AA seq
DB search
MFENLQERLGKTLKNISGRGRLTEDNIKDTLREVRMAFLEADVALPVVREFVKQVKERAV
GVEVTKSLSPGQVFIKIVREELEKAMGEANEELNLNAQPPAVVMMAGLQGAGKTTSVGKL
AKFLKERKKKSVLVVSADVYRPAAIKQLETLANEVGVDFFPSDISQKPVDIANAAISHAK
KKFIDVVLVDTAGRLHVDSDMMDEIKALHSAITPIETLFVVDAMTGQDAANTAKAFDEAL
PLTGVILTKTDGDARGGAALSIRHITGKPIKFMGVGERTDALEPFHPDRIASRILGMGDV
LSLIEEVEMKVDKEKAAKVAEKVFKGDGFTLDDFAEQLKQMKNMGGMMSMLDKLPGMQNL
PDAVKGQMGDKTFIQMEAIISSMTKQERARPEIIKGSRKKRIAAGSGTQVQEINKLLKQF
TQMQKMMKKMKGKGGMMKMMRGMKGMLPPGMMGGGGPKF
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaacctccaagaacgattaggtaaaaccttaaaaaatattagcggccgtggg
cgccttactgaagataatatcaaagatacgctacgtgaagtacgtatggcttttttagag
gctgacgttgcgctacccgtcgttcgtgagtttgtgaaacaagttaaagaacgtgctgtg
ggtgttgaagtaacaaaaagcttaagcccagggcaagtgttcataaaaattgttcgtgaa
gaacttgaaaaagcgatgggtgaagcgaatgaagagctaaacctaaacgcacaaccgcca
gcagttgttatgatggcaggcttacaaggtgcaggtaaaaccaccagcgtcggtaagtta
gctaaattcttaaaagagcgtaagaaaaagtcagtactagttgttagtgccgatgtttat
cgccccgctgcaataaaacagttagaaacgctggctaacgaagttggtgtagactttttc
ccaagtgatatttcccaaaagccggttgatattgctaatgcggctatctctcatgcgaaa
aagaaatttatcgatgtggtacttgtcgataccgcaggtcgtttgcacgttgatagcgat
atgatggatgaaatcaaagcgttacacagtgctattacgccaatcgaaaccttatttgta
gttgatgcaatgacaggtcaagatgcggctaatacagctaaagcgtttgatgaagcattg
ccgcttacgggtgttattttaactaaaaccgatggtgatgcgcgcggtggtgcggcatta
tctattcgccatatcacgggtaaaccaattaaatttatgggtgtgggggagcgtactgat
gcccttgagccttttcatcctgaccgtattgcttcacgtattttaggtatgggtgatgta
ctttcattgatcgaagaagtcgagatgaaagtagataaagaaaaagcggccaaagtagct
gaaaaagtatttaaaggcgatggctttacccttgatgattttgctgaacaattaaagcaa
atgaaaaacatgggcggcatgatgtcgatgcttgataagctgccgggtatgcaaaactta
ccggatgcagtaaaagggcaaatgggtgataaaacatttattcaaatggaagcaatcatc
agctcaatgactaaacaagagcgtgctcgccctgaaatcatcaaaggttctcgtaaaaaa
cgtattgcagcaggctctggtacacaagtgcaagagatcaataaattgctaaaacaattt
acccaaatgcaaaagatgatgaaaaaaatgaaaggtaaaggtggcatgatgaaaatgatg
cgtggaatgaaaggcatgttaccaccgggaatgatgggcggtggcggtcctaaattctaa
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