Pseudoalteromonas sp. KAN5: KAN5_20450
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Entry
KAN5_20450 CDS
T10721
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
pska Pseudoalteromonas sp. KAN5
Pathway
pska03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pska00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KAN5_20450 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pska03400
]
KAN5_20450 (ung)
Enzymes [BR:
pska01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
KAN5_20450 (ung)
DNA repair and recombination proteins [BR:
pska03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KAN5_20450 (ung)
Prokaryotic type
KAN5_20450 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
BDF95207
LinkDB
All DBs
Position
complement(2340608..2341270)
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AA seq
220 aa
AA seq
DB search
MSDWQDFLTTECAKPYMQQTLDTVAQKRSEGIAVYPPQSQVFSAFDATPLSEIKVVILGQ
DPYHGEGQAHGLCFSVLPEVSKLPPSLKNIYKELAADILGFSIPTHGYLQRWAEQGVFLL
NTVLTVEQGQAHSHKHLGWEQFTDQVIAHINQHCEGVVFILWGAHAQKKGKGIDSNRHHV
LNGPHPSPLSAHRGFFGCQHFSTTNQLLTQQGKTAIDWQV
NT seq
663 nt
NT seq
+upstream
nt +downstream
nt
atgagtgattggcaagactttttaacaaccgaatgtgcaaaaccttatatgcaacagacg
cttgatacggtagcacaaaagcgcagcgaaggcatcgcggtatatccgcctcaatcacag
gtatttagcgcttttgatgcaacaccgctgagtgaaataaaagtcgtgatcttaggacaa
gatccatatcacggcgaaggccaagcgcatggtttgtgtttctctgtgttgcctgaagtc
agtaaactgccgccgtcattaaaaaatatttataaagagctggcggctgatattctaggt
ttcagcattccaacacatggttatttacaacgttgggcagagcagggggtgtttttactc
aataccgtattaacggttgaacaaggccaagctcattcgcataagcatttggggtgggag
cagtttactgatcaagtgattgcccatattaaccaacactgcgagggtgtggtgtttatt
ttatggggtgctcatgcgcaaaaaaaagggaagggcattgatagcaaccgtcatcatgtt
ttaaatggcccacatccttcgccgttgtctgcccatcgtggcttttttggttgtcagcat
ttttctacaaccaatcagttattaacccagcaaggtaaaaccgcgatcgattggcaagtt
taa
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