Pseudoalteromonas sp. LC2018020214: JG479_12210
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Entry
JG479_12210 CDS
T10970
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
pslc Pseudoalteromonas sp. LC2018020214
Pathway
pslc02020
Two-component system
pslc02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
pslc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
JG479_12210
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
JG479_12210
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
pslc02035
]
JG479_12210
Bacterial motility proteins [BR:
pslc02035
]
Flagellar system
Chemotaxis proteins
MCPs
JG479_12210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
HAMP
TMP_3
DUF7971
Motif
Other DBs
NCBI-ProteinID:
QQM63489
LinkDB
All DBs
Position
1:2748058..2749899
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AA seq
613 aa
AA seq
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MSGLRQFSFPAIQLMANLKYKTKISLMFGILLVPLALSLFFLVSLLSESIAVSKMQQQGL
KGYRAILSNQMQGDTNQNIKIARSLGFDIKDTQANEVLELVSIQSNLALDSQLASAYVNR
SLVTPIPALIMQINSTAQSANTVLASNRFTPDTFIALSNFSKSLPLYEKQLDKILNVATN
ADKSVNKALMPSLNNLHSAVDAFKKAIDEKLLEPDDILLTQAEFTKLTNNVHSSINQLVS
KSIPTLESLIEAKLQTQQWTRNLVLAASLISLLFAFYLMIGFYFAVVDTINRFADAANRA
ANGDLNATIDSSTNDEMGIIASRYNALLNAFSHLLFDVKASTEELCDATKSLSHASSETS
NDVSKQQIRVNAIYNALSDMAQNALAVEESAHQATLTAQNAAAHVKQGSDNTMELAKYMQ
DLQIEFAESQQALDKLAQDSQEISKVSKGISEIADQTNLLALNAAIEAARAGEHGRGFAV
VADEVRTLAQRTQTQTQEIHQIISSLQQASDDTQQKMRSSVEKMEQSVKAANQTNEVLQS
AEQSMGDIKHQGEVIAERVKQQSNATTQALNDSQEVSNLADQTLTSAQSTLQDAQQLSRL
SNDLTKSMQFFKS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggattacgccaattttcttttcccgctatccagctaatggcaaacttaaaatac
aaaactaaaatcagcttaatgtttggaattttactcgttcctctagcacttagtttgttt
tttttagtctcgttattaagtgaaagtattgctgtttcaaaaatgcagcagcaaggctta
aaaggctacagagctatactttcaaatcaaatgcagggagatacgaatcaaaatataaaa
atagctcgttcactcggctttgacataaaagacactcaagccaatgaagtacttgaactt
gtttctattcaatcaaatctagccttagacagtcaattagcaagcgcttatgtaaaccgc
tctttagtcacaccaattcctgcacttataatgcaaataaactcaacagcgcaaagcgct
aatactgttttagctagtaaccgttttacgcccgatacgtttatagcactttcaaatttt
agtaagtcacttcctttatacgaaaaacaactcgataaaatactcaatgtagccaccaat
gcagataaatcagtaaacaaagcgcttatgccttcgttaaataatttacacagtgctgtg
gatgcatttaaaaaagcgatagatgaaaaactacttgaaccagacgatattctattaact
caagcagagttcactaagctaacaaacaacgttcacagtagtattaatcaacttgttagt
aagagcattccaacacttgagagccttatagaggcaaaactacaaactcaacagtggaca
cgaaatcttgttttagctgcttcattgattagtttgctatttgcattttatttgatgatt
ggtttttattttgcagttgttgataccattaatcgctttgctgatgccgcgaatagagcc
gcgaatggcgacttaaatgcaactatcgattcgagcactaatgatgaaatgggaattatt
gcatcgcgctacaacgcactacttaacgcattttcacatttattatttgatgttaaagca
agtacagaagagctatgcgatgcaactaaatcgctatcacatgcgagtagcgaaacaagc
aatgatgtttcaaaacagcaaattcgagtcaatgccatttataatgcactaagcgatatg
gctcaaaacgcacttgcagttgaagagtcagcgcatcaagctacgcttaccgcacaaaat
gctgctgctcatgtgaaacaaggttcagataatacaatggagcttgctaaatatatgcaa
gacctccaaattgaatttgcagagagccaacaagcgctcgataaactagcacaagatagc
caagaaattagcaaagtaagtaaagggatcagtgaaatagccgatcaaacaaacttgctt
gcacttaatgccgctattgaagccgcgcgagccggcgagcatggccgtggatttgccgtt
gtagctgatgaggtaagaacacttgctcagcgtacacaaacacaaacccaagaaatacat
caaattattagctctttacaacaagcatctgacgacactcagcaaaaaatgcgctcaagt
gttgaaaaaatggagcaatcagtaaaagcagccaatcaaaccaatgaagtattacaaagt
gcagagcaaagtatgggcgatattaaacatcaaggtgaagtaattgcagagcgtgttaaa
cagcaatcaaatgcaacaacacaggcattaaatgattcgcaagaagtgagtaatttagca
gatcaaacgctaacatcagctcagtcaacgctacaagatgcacagcaattaagtcgctta
tctaatgatttaaccaaatcaatgcagttttttaaatcttaa
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