Pseudoalteromonas sp. SM9913: PSM_A0405
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Entry
PSM_A0405 CDS
T01374
Symbol
ksdD
Name
(GenBank) D-arabinose 5-phosphate isomerase
KO
K06041
arabinose-5-phosphate isomerase [EC:
5.3.1.13
]
Organism
psm
Pseudoalteromonas sp. SM9913
Pathway
psm00541
Biosynthesis of various nucleotide sugars
psm01100
Metabolic pathways
psm01250
Biosynthesis of nucleotide sugars
Module
psm_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
psm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PSM_A0405 (ksdD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
psm01005
]
PSM_A0405 (ksdD)
Enzymes [BR:
psm01000
]
5. Isomerases
5.3 Intramolecular oxidoreductases
5.3.1 Interconverting aldoses and ketoses, and related compounds
5.3.1.13 arabinose-5-phosphate isomerase
PSM_A0405 (ksdD)
Lipopolysaccharide biosynthesis proteins [BR:
psm01005
]
Lipid A
PSM_A0405 (ksdD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
CBS
SIS_2
CoA_binding_2
DUF2529
Motif
Other DBs
NCBI-ProteinID:
ADT67359
LinkDB
All DBs
Position
I:complement(435014..435985)
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AA seq
323 aa
AA seq
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MSTLNFIQQGLRVLEIERQALSDITQYVNESFNQACQLMFDCSGRIIVIGMGKSGHIGNK
IAATLASTGSPAFFVHPGEASHGDLGMITANDVVILISNSGETSEVLNIIPVLKRIGAKM
IAMTGNQGSTMATLANVHVCIKVEQEACSLGLAPTASTTATLAMGDAMAVALLEARGFTA
DDFALSHPGGSLGKRLLLTLKDVMHSGADTPIINETQTIKDALIEMSAKGLGMTAIVDSD
QQLSGLFTDGDLRRILEQRIDIHSTEINVVMTKSCTTATQEMLAAEALNIMEQKRINGLI
VINEHNQPIGALNMQDLLKAGVL
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgctaaactttattcaacaagggttacgtgttctagagattgaacgccaagca
ctcagcgatattacacaatacgttaatgaaagctttaaccaagcctgtcaattaatgttt
gactgctcaggtcgtattattgttattggcatgggtaaatcaggccatattggtaacaaa
atagccgccactcttgccagtaccggcagccccgcattttttgttcacccgggtgaagca
agccatggtgatttaggaatgatcacagcaaatgacgtggttatcctcatttcaaactct
ggtgaaaccagcgaagtacttaatattattccagtattaaagcgcattggtgccaaaatg
attgccatgacaggcaaccaaggctcaaccatggcaacattggcaaatgtgcatgtgtgt
attaaagttgaacaagaagcctgctcattgggcttagcacctactgcaagtaccactgcc
acactcgctatgggtgatgccatggcggtggcattattagaagcacgcggctttactgct
gatgattttgcactatcgcaccctggtggtagcttaggcaagcgattactcttaactctt
aaagatgttatgcacagtggtgctgatacacctatcattaacgagacgcaaacgattaaa
gatgccttaattgaaatgtcggccaaaggactcggcatgaccgctattgttgatagtgac
cagcaattatcaggcctgtttaccgatggcgatttacgccgtattttagagcaacgtatt
gacattcatagcactgaaattaatgttgtgatgaccaagtcgtgtactacagccacccaa
gagatgctcgcggctgaagcgttaaatattatggaacaaaaacgtattaatggtttaatt
gtaattaatgagcataatcaaccgattggcgcactaaatatgcaagacttacttaaagcg
ggagtgctataa
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