Pseudoalteromonas sp. SM9913: PSM_A2000
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Entry
PSM_A2000 CDS
T01374
Symbol
mrdA
Name
(GenBank) cell elongation-specific transpeptidase of penicillin-binding protein 2 (peptidoglycan synthetase)
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
psm
Pseudoalteromonas sp. SM9913
Pathway
psm00550
Peptidoglycan biosynthesis
psm01100
Metabolic pathways
psm01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
psm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
PSM_A2000 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
PSM_A2000 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
psm01011
]
PSM_A2000 (mrdA)
Enzymes [BR:
psm01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
PSM_A2000 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
psm01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
PSM_A2000 (mrdA)
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
ADT68923
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Position
I:2142916..2144796
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AA seq
626 aa
AA seq
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MLKRRPTIRDHSAEANLFARRAFVGFIFILVLVAILLSNLYKIQVDDHQDYQTRSNDNRI
KVIPIAPNRGLIYDRNGVLLAENKPVYNLEVIPEEVNDLTASLKSISKIIEITEQQQADF
LDDIKHTRRFKSQVLKARLNENEVAMFSVNQHKFPGFSIEARLARYYPFGDTLTHALGYV
AKLNRKELNKLEQQDEATNYRATHDIGKLGIEKYYEPLLHGQVGSQRVEVNNRGRIIRTL
SMDPPQAGDDLVLTLDIGLQQIAQHALKDMRGAIVVMDAKDGGVLALYSNPSYDPNLFVH
GISSKDYKALLNPDRPLINRTTQGRYAPASTVKPHMAILALEENIVQETTSMWDPGFFQI
PNVEHRWRDWRRWGHGHVDVYKAIEESCDTYFYDAAYRMGITKISNFMARFGFGELSGID
IHEETTAILPSKEWKEARFKESWWPGDTISVGIGQGYWTATPIQIANATNILVNRGINHP
PHLVQVAKKEDQITQLNNEEKPPVVLNNEDNWRIAIDAMHNTVKKTTGTAHRAFKGATYD
PAGKTGTAQVVSIAQGERYDADALKERQRDNAIYIGFAPFNNPQIVVSIVVENTGGGSSV
GAPIARQLMDYYFAANPIQPSGDKAP
NT seq
1881 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaacgaagacccaccattcgcgaccactcagcagaagctaatttatttgctcgg
cgtgcattcgtgggttttatttttatattagtccttgtagcaatattgctgtctaacttg
tataaaattcaggtagatgatcatcaagattatcaaactcgttctaatgataaccgtata
aaagttatacctatagcccccaatcgcggtttaatttacgaccgcaatggtgttttacta
gccgaaaataagcccgtttataaccttgaggtgatccccgaagaagttaatgatttaacc
gcctctttgaagtctatcagcaaaatcattgaaataaccgagcagcaacaagctgatttt
cttgatgatataaaacatactcgacgttttaaaagtcaagtcctcaaagcccgtttaaat
gaaaacgaagtagcgatgttttcagtaaaccaacataagttcccaggctttagtattgag
gcacgtctagcgagatattacccctttggcgatactttaacccatgcattaggctatgtc
gcaaagctcaatagaaaagagttaaacaagcttgaacaacaagatgaagccacaaactac
cgagccacgcatgatattggtaagctgggtatcgaaaagtactacgagccgttattacat
ggtcaagttggctcacaacgagttgaagttaataaccgcggccgaattatccgcacttta
agtatggatccaccgcaagcgggtgacgacttagtacttactctcgacattggtttacaa
caaatagcccaacatgcacttaaagatatgcgcggcgctattgtggtaatggatgcaaaa
gatggcggcgttttagcgctgtattcaaacccaagttatgatcccaatttatttgtgcat
ggtattagcagtaaagactacaaagccttactcaaccctgatcgtccactgatcaatcgc
acgactcaaggtcgctacgcaccagcatctactgttaaaccacacatggctattttggca
ttagaagaaaatatagtgcaagaaaccaccagcatgtgggatccgggcttttttcaaatt
cccaacgtagagcatagatggcgtgattggcgacgttggggccatggccatgtggatgtt
tataaagcaatagaagagtcatgcgatacctacttttatgacgcagcctatcgaatgggg
atcacaaaaataagtaattttatggctcgctttggctttggtgaattatccggtattgat
attcatgaagaaacaaccgctattttaccctcaaaagagtggaaagaagcccgttttaaa
gagtcttggtggcctggagatactatttctgtaggaattggccaaggttattggactgcc
acccccattcaaatagcgaatgccactaatattttagttaacagagggataaatcaccct
ccgcatttagtgcaagttgctaaaaaagaagatcaaattactcagctcaataatgaagaa
aaaccgccggttgtactcaataacgaagataactggcgcatcgcgattgatgccatgcat
aacaccgttaaaaaaaccaccggaactgcccatcgtgcgtttaaaggggctacttatgac
cctgcaggtaaaaccggtactgcccaagtggtgagtattgctcagggcgagcgttacgac
gccgatgcactcaaagagcgccaacgcgacaacgccatttatataggttttgccccgttt
aataacccacaaattgttgtctctattgtggtagaaaataccggtgggggaagctcagta
ggtgcgcccattgcgcgccaattaatggattactattttgcagctaacccaatccaacct
tcaggggacaaagcaccatga
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