Pseudoalteromonas sp. MM1: PspMM1_21480
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Entry
PspMM1_21480 CDS
T09926
Symbol
kdsA
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
psmm
Pseudoalteromonas sp. MM1
Pathway
psmm00541
Biosynthesis of various nucleotide sugars
psmm01100
Metabolic pathways
psmm01250
Biosynthesis of nucleotide sugars
Module
psmm_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
psmm00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PspMM1_21480 (kdsA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
psmm01005
]
PspMM1_21480 (kdsA)
Enzymes [BR:
psmm01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
PspMM1_21480 (kdsA)
Lipopolysaccharide biosynthesis proteins [BR:
psmm01005
]
Lipid A
PspMM1_21480 (kdsA)
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
LNYV_PP_C
Motif
Other DBs
NCBI-ProteinID:
BED89680
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Position
1:complement(2429276..2430130)
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AA seq
284 aa
AA seq
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MNNQVININNIELANDKPFVLFGGMNVLESRDLAMRIAEHYVEVTSKLNIPYVFKASFDK
ANRSSINSYRGPGMEEGLKIFEEIKNTFNIPLITDVHEPHQAAPVAEVVDVIQLPAFLAR
QTDLVVAMAKTGAIINVKKPQFLAPHEMRHIITKFNEAGNNNVALCERGSSFGYNNLVVD
MLGMDDMKAMAPVIFDATHALQRPGGRADSADGRRAQAAELARSGMALGIAGLFIEAHPN
PNEAKCDGPCALALSKLEGYLSQMKAVDDLVKSFAPLDTSASDL
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatcaagtaattaatatcaataatattgaactggcaaacgacaaaccctttgta
ttgtttggtggtatgaatgttttagagtcacgcgatttagcgatgcgtattgctgagcac
tatgtagaagtaacctctaaattaaatattccttatgtatttaaagcctcgtttgataaa
gcgaaccgctcttcaataaactcataccgcggccctggtatggaagaaggcttaaaaata
tttgaagagattaaaaatacctttaatattccactgataactgacgtgcacgaacctcat
caagcagcgcctgttgctgaagtagttgatgtaattcagttacctgcatttttagcacgc
caaaccgatttagtggtagctatggctaaaacgggtgccattattaacgtgaaaaaacca
caatttttagcccctcatgaaatgcgtcatatcattactaaatttaatgaagcgggtaac
aacaatgttgcactgtgtgagcgcggctcaagctttggctataacaacttagtggttgat
atgctaggtatggatgatatgaaagctatggcaccggttatttttgatgcaacccatgca
ctacaacgtccaggcgggcgagcagactctgcagatggacgccgtgcacaagctgccgag
cttgctcgcagcggcatggcactgggtattgcgggcttatttattgaagctcaccctaac
cctaatgaagcaaagtgtgatggtccatgtgctttggctctaagcaagcttgaagggtat
ttatcgcaaatgaaagcggtagatgatttagttaaaagctttgcaccacttgatacaagc
gcaagcgacttataa
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