Pseudomonas sp. NyZ201: ACPFMA_03035
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Entry
ACPFMA_03035 CDS
T11215
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
psny Pseudomonas sp. NyZ201
Pathway
psny03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ACPFMA_03035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psny03021
]
ACPFMA_03035
03400 DNA repair and recombination proteins [BR:
psny03400
]
ACPFMA_03035
Enzymes [BR:
psny01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ACPFMA_03035
Transcription machinery [BR:
psny03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ACPFMA_03035
DNA repair and recombination proteins [BR:
psny03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ACPFMA_03035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
AMIN-like
Motif
Other DBs
NCBI-ProteinID:
XRQ39472
LinkDB
All DBs
Position
676238..677239
Genome browser
AA seq
333 aa
AA seq
DB search
MQISVNEFLTPRHIDVQVVSPTRAKITLEPLERGFGHTLGNALRRILLSSMPGCAVVEAE
IDGVLHEYSAIEGVQEDVIEILLNLKGLAIKLHGRDEVTLTLSKKGSGVVTAADIQLDHD
VEIVNPDHVIANLASNGALNMKLTVARGRGYEPADSRQSDEDESRSIGRLQLDSSFSPVR
RIAYVVENARVEQRTNLDKLVIDLETNGTLDPEEAIRRAATILQQQLAAFVDLKGDSEPV
VVEQEDEIDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRTEVELLKTPNLGKKSLT
EIKDVLASRGLSLGMRLDNWPPASLKKDDKATA
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcagatttcggtaaatgagttcctgacgccccgccacatcgatgtgcaggtcgtcagt
ccaacccgcgctaaaatcacgctcgagcctctcgagcgtggtttcggccataccctgggc
aacgcgctgcgccgcatcctgttgtcctccatgcctggctgtgcagtagtcgaggccgag
atcgatggcgtactccacgagtactccgcgatcgaaggtgtacaggaagacgtcattgaa
atcctgttgaacctgaaaggcctggctatcaaactgcacggtcgtgacgaagttacgctg
accttgtcgaagaagggttcgggggtggttaccgctgccgatattcagctggatcatgat
gtcgagatcgttaatcccgatcacgtaatcgctaacctggcgtccaacggcgccctgaac
atgaagctcaccgtagctcgtggtcgtggttatgagccggccgattcgcgtcagagcgat
gaggatgaaagccgcagcatcggtcgcttgcagctcgattcctcgttcagcccggttcgc
cgtatcgcatacgtggtggaaaacgcccgtgtcgagcagcgtaccaacctggacaagctg
gttattgatctggaaaccaacggtaccctggatcctgaagaggcaatccgtcgtgctgca
accatcctgcaacagcagctggctgcattcgtcgacctcaaaggtgacagcgagcccgtg
gtagtcgagcaggaagacgagatcgatccgatcctgcttcgtccggttgacgatctggaa
ttgaccgtacgttcggccaactgcctgaaggcggagaacatctactacatcggcgatctg
attcagcgcaccgaagtagagctgttgaagactccgaacctcggcaagaagtccctgact
gaaatcaaggacgttctggcttcccgtggtctgtccctcggcatgcgcctcgacaactgg
ccgcctgcaagtcttaagaaagacgacaaggcgactgcctga
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