Pseudomonas sp. NyZ201: ACPFMA_05980
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Entry
ACPFMA_05980 CDS
T11215
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
psny Pseudomonas sp. NyZ201
Pathway
psny03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
ACPFMA_05980 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psny03400
]
ACPFMA_05980 (ung)
Enzymes [BR:
psny01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
ACPFMA_05980 (ung)
DNA repair and recombination proteins [BR:
psny03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
ACPFMA_05980 (ung)
Prokaryotic type
ACPFMA_05980 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
XRQ40009
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All DBs
Position
1288554..1289246
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AA seq
230 aa
AA seq
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MTDDDRIKLEPSWKAALRAEFDQPYMHELREFLRQEKAAGKEIYPPGPLIFNALNSTPLD
KVKVVILGQDPYHGPGQAHGLCFSVQPGVPTPPSLVNIYKELQRDLNIEIPRHGYLQSWA
DQGVLLLNTTMTVERANAASHANKGWQFFTDRIIQVVSEHQPNSVFLLWGSHAQSKRKLI
DASKHLVLTSVHPSPLSAYRGFLGCGHFSRTNKFLEQHGMAPIDWQVPAL
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgacgaccgtatcaagctcgaacccagctggaaggccgccctgcgtgccgaa
ttcgaccagccctacatgcacgaactgcgtgaattcctgcgtcaggaaaaggccgctggc
aaggagatctatccgcccgggccgctgattttcaacgcgctgaattccacgccgctggac
aaggtcaaggtggtgatcctcggccaggacccgtaccacggcccgggccaggcccatggg
ctgtgcttctcggtgcagccgggggtgccgacgccgccgtcgctggtcaacatctacaag
gaactgcagcgcgatctgaacatcgagattccgcgccacggctacctgcaatcctgggcc
gaccagggcgtgctgctgctcaacaccaccatgaccgtcgaacgggccaacgcggcgtcc
cacgccaacaagggctggcagttctttaccgaccggatcatccaggtcgtcagcgagcac
cagcccaactcggtgttcctgctctggggctcgcatgcccagagcaagcgcaagctgatc
gatgccagcaagcacctggtgctgacctcggtgcacccttcgccgctgtcggcctatcgc
ggcttccttggttgtggccatttcagccgcaccaacaagttcctcgaacagcacgggatg
gcgccgatcgattggcaggtgcctgccctttag
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