Pseudomonas sp. NyZ201: ACPFMA_19295
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Entry
ACPFMA_19295 CDS
T11215
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
psny Pseudomonas sp. NyZ201
Pathway
psny03030
DNA replication
psny03430
Mismatch repair
psny03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psny00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACPFMA_19295 (dnaX)
03430 Mismatch repair
ACPFMA_19295 (dnaX)
03440 Homologous recombination
ACPFMA_19295 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
psny03032
]
ACPFMA_19295 (dnaX)
03400 DNA repair and recombination proteins [BR:
psny03400
]
ACPFMA_19295 (dnaX)
Enzymes [BR:
psny01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACPFMA_19295 (dnaX)
DNA replication proteins [BR:
psny03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACPFMA_19295 (dnaX)
DNA repair and recombination proteins [BR:
psny03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACPFMA_19295 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNA_pol3_gamma3
DNAX_ATPase_lid
DNA_pol3_tau_5
AAA
RuvB_N
AAA_5
AAA_22
ResIII
AAA_14
AAA_16
AAA_30
PIF1
AAA_18
AAA_19
AAA_2
TsaE
nSTAND3
AAA_7
DUF3646
HasA
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
XRQ37159
LinkDB
All DBs
Position
complement(4353523..4355556)
Genome browser
AA seq
677 aa
AA seq
DB search
MSYQVLARKWRPRSFREMVGQTHVLKALINALDNQRLHHAYLFTGTRGVGKTTIARIIAK
CVNCETGITSTPCGTCSVCREIDEGRFVDLIEIDAASRTKVEDTRELLDNVQYAPSRGRF
KVYLIDEVHMLSSHSFNALLKTLEEPPPYVKFILATTDPQKLPATILSRCLQFSLKNMTP
ERVVEHLSHVLGVENVPFEDDALWLLGRAADGSMRDAMSLTDQAIAFGEGKVLAADVRAM
LGTLDHGQVYGVLQALLEGDARALLEAVRHLAEQGPDWNGVLSEMLNVLHRVAIAQALPE
AVDNGQGDRDKVLALAQALPAEDVQFYYQMGLIGRRDLPLAPDPRGGFEMVLLRMLAFRP
ADSGDAPGTTLKPVGISQATTDSPAPVAPVAIAAPAPEPVSAPAPVVETVPEPAPEPAPQ
PEPEPEPVVAAEPEPEIEEVTDLPWEDPIPVAVAAPEPEPAPAPVAAAPPAAPREEPPHD
DQAYAPAGMDRDDEPPPDDDYYMGEVDPAGYSYLDELATEHAAELSAEPAPEPEPEPAAQ
PATGLALQWLELFPHLPISGMTGSIAANCTLVSAEGDNWLLHLDPNHSALFNATQQRRLN
EALNQHLGRTLNLSIELIRPEQETPAQAAARKRANRQREAEQSIENDPFIQQMIQKFGAS
VRHDTIEPVDAVVTQGE
NT seq
2034 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggtccttgcacgtaaatggcgtccgcgctcgttccgcgaaatggtcggc
cagacccacgtgctcaaggccttgatcaacgcactcgataaccagcgcctgcaccatgcc
tatctgttcaccggcacccgcggggtcggcaagaccaccatcgcgcggatcatcgccaag
tgcgtgaactgcgaaaccggcatcacctcgaccccctgcggcacctgctcggtgtgccgg
gagatcgacgagggccgcttcgtcgacctgatcgagatcgacgccgcgagccggaccaag
gtcgaggacacccgcgaactgctggataacgtgcagtacgcgccgagccgcgggcgcttc
aaggtctacctgatcgacgaagtgcacatgctttccagccattccttcaacgccctgctg
aagaccctggaagagccgccgccctacgtcaagttcatcctggccaccaccgacccgcag
aagctgccggcgaccatcctgtcccgctgcctgcagttctccctgaagaacatgaccccc
gagcgggtggtcgagcacctgagtcatgtgctcggtgtggagaacgtgccgttcgaggac
gatgccctgtggttgctcggccgcgctgccgacgggtcgatgcgcgacgccatgagcctg
accgaccaggccatcgcctttggcgagggcaaggtcctggccgccgatgtgcgggcgatg
ctcgggaccctcgaccatggccaggtctacggcgtgctccaggccttgctggaaggcgat
gcccgggcgctgctggaggccgtgcgccatctggccgagcaggggccggactggaacggt
gtgttgtcggaaatgctcaacgtgctgcaccgcgtggccatcgcccaggcgctgcccgag
gcggtggacaacggccagggcgatcgcgacaaggtactggcgctggcccaggccctgccg
gccgaggatgtgcagttctactaccagatgggcctgatcggccggcgtgacctgcccctg
gcgccggacccgcgtggcggcttcgagatggtgttgctgcgcatgctggcgttccgtccg
gcggacagcggcgatgccccgggcacgacgctaaagccagtggggatcagccaggccacg
actgattccccggcaccggtggccccggttgcgatcgccgcacccgccccggagcctgtc
agtgctcccgctccggtcgtcgagacggtgcctgagcccgcgcccgagccagcgccgcaa
cccgaaccggaacccgagcccgttgtcgcagccgagcccgagccggaaatcgaggaagtc
accgacctgccctgggaagacccgattcccgtggccgtcgctgcacctgaacccgagcca
gccccggcccctgtcgccgccgcgccgcctgccgccccgcgcgaagaaccgccccacgac
gaccaggcctacgcccccgccggcatggaccgcgacgacgagccgccgccggacgacgat
tactacatgggcgaagtggacccggccggctacagctacctggacgaactggccaccgag
cacgccgccgaactcagcgccgagccggccccggagccggagcccgagcccgctgcgcaa
ccggccacgggcctggccttgcaatggctggagctgttcccgcacctgccgatttccggc
atgaccgggagcatcgcggccaactgcaccctggtcagcgccgaaggcgacaactggctg
ctgcacctggacccgaaccacagtgccctgttcaacgccacccagcagcgccgcctgaac
gaggcgctgaaccagcacctgggccgcaccctgaacctgagcatcgagctgatccgcccc
gagcaggaaaccccggcccaggccgcggcacgcaagcgggccaaccgccagcgcgaggcc
gagcagtcgatcgagaacgacccgttcatccagcagatgatccagaagttcggtgccagc
gtgcgccacgatactattgaacctgtcgacgccgtggtgacccaaggcgaataa
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