Phytophthora sojae: PHYSODRAFT_263181
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Entry
PHYSODRAFT_263181 CDS
T03459
Name
(RefSeq) hypothetical protein
KO
K12821
pre-mRNA-processing factor 40
Organism
psoj
Phytophthora sojae
Pathway
psoj03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
psoj00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PHYSODRAFT_263181
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
psoj03041
]
PHYSODRAFT_263181
Spliceosome [BR:
psoj03041
]
Complex A
U1 snRNP components
U1 related factors
PHYSODRAFT_263181
Complex B
PHYSODRAFT_263181
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WW
FF
CDC45
DUF4045
DDHD
Motif
Other DBs
NCBI-GeneID:
20639473
NCBI-ProteinID:
XP_009529797
JGI:
Physo3_263181
UniProt:
G4ZMS8
LinkDB
All DBs
Position
Unknown
AA seq
515 aa
AA seq
DB search
MLAAALRLFGPDLGLLLVALALGLRRGESLSFSLLELQHARCGGAGVASVALALQSPLLL
LQLLLVLEQLGHALLRLGLERLHLLQLRLEVQQQLLLLVLLHHYRIAMELHTPPPPPPSP
PPSDTELTAEQKLYWLNALQVVGDWSVHDDGDGRLFYYDRRTDSSQWEVPDGLASLETEF
MMKLMLQNAVARSGVWTAHDAGNGTLYYFNSKTRVSVWERPSEWGEAEAAAAAEAREREA
MAELARKEKEKQAQEAEKAAKKEKKKHKKQKKQKEKRDDEAVAEAEQTSEGKEVKEQEPT
PQQEVEEEEPLTTEEIQEEQERKAREQKRIEQFRAMLRDKNIMPFCKWSVALPQIAGDPR
FMGVPTMDERRAIFEHFVEHRREDLKADKKGKLKQAKQAFAQLLKEQFQFDSWEPKTTLS
VFISTLEEQLQPDRYKQVQENALALLTLSAQEKIYAKAVAEYKTEALKRDGEQLRLTKFF
EEKLTTLDTSAMRWESGELRRVCGATFGAEAEATV
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgctcgcggcggcgctgcgcctcttcggccctgaccttggcctccttctcgtcgcactc
gcgcttggcctccgccgcggcgagtcgctctctttctctctcctggagctgcagcatgcg
cgctgtggcggcgccggcgtcgcgtcggtcgctttggcgctgcagtcgccgctgctgctg
ctccagttgcttttggtcctggagcagctgggccacgcgctgctgcgtctgggacttgag
cgcctgcacctgctgcagctccgcctcgaggtccagcagcaactgctcctcctcgtactc
ctccatcattaccgtatcgccatggagctccacacgccgccgccgccgcctccttcgcct
cctcccagcgacacggaactgactgcggagcagaagctgtactggctcaatgcgctgcag
gttgtgggcgactggtccgtgcacgacgacggcgacgggcgtctcttctactacgaccgg
aggacggactcgtcccaatgggaagtgcccgatggccttgcgtcgctcgagaccgagttc
atgatgaagctcatgctgcagaacgcagtggctcgctccggggtttggacggcgcacgac
gcgggcaatggcacgctctactacttcaactcgaagacgcgcgtgtcggtgtgggagcgg
ccgagtgagtggggcgaggcggaagctgcagcagccgcagaggctcgtgagagggaggcc
atggcggagttggcaagaaaggagaaggagaagcaagcgcaagaagcagagaaggcggcg
aagaaggagaagaagaaacacaagaagcagaaaaagcagaaggagaagcgagatgacgag
gctgtggcggaggcggagcagaccagcgaagggaaggaagttaaggagcaggagccaaca
ccacagcaagaagtcgaggaggaggaaccgctgaccacggaggagattcaggaggagcag
gaacgtaaggcgcgtgaacaaaagcgcatcgagcagttccgcgcgatgctgcgcgacaag
aacatcatgccgttctgcaagtggtcggtagcgttgccgcagattgctggagacccccga
tttatgggtgtgccgaccatggatgagcgtcgtgcgatttttgaacactttgtcgagcac
cgtcgagaagaccttaaggcggacaagaagggcaagctgaagcaggccaagcaagcgttc
gctcagttactgaaagagcagttccagttcgactcgtgggagccgaaaacaacgctgagt
gtatttatttcgacacttgaagaacagctccagcctgatcgctacaagcaggtccaagaa
aacgcgttggcattgctgactctgtcagcccaagagaagatttatgcaaaagcggtggca
gaatacaagaccgaggctctgaagcgagatggagagcaactgcggctaaccaagttcttc
gaagaaaagctcactacgctggacacgtcggctatgcgatgggagagtggcgagctccgc
agagtctgcggcgctactttcggcgcagaagcagaagcaactgtttga
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