KEGG   Papaver somniferum (opium poppy): 113298019
Entry
113298019         CDS       T05758                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
psom  Papaver somniferum (opium poppy)
Pathway
psom03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:psom00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113298019
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:psom03041]
    113298019
   03036 Chromosome and associated proteins [BR:psom03036]
    113298019
Spliceosome [BR:psom03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    113298019
 Complex B
    113298019
 Complex C
   U2 SnRNP specific factors
    113298019
Chromosome and associated proteins [BR:psom03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    113298019
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_MROH2B_C HEAT TPR_DNAAF5 HEAT_EF3_N TPR_IPO5 Htt_N-HEAT_1 HEAT_2 Cnd1 XMAP215_CLASP_TOG Vac14_Fab1_bd Adaptin_N UME
Other DBs
NCBI-GeneID: 113298019
NCBI-ProteinID: XP_026402442
LinkDB
Position
7:103422169..103426602
AA seq 1281 aa
MDPEIAKTQEERKRMEQQIASLSTVTFDTEFYDSTGNRYEGYESSIAVTEEEETVDPSLS
DVPRRLASYTAPQSLMKDIARSAEEHNSNNNNNNNNGSGLNETSRRIIDREDEYRRRRLN
QVLSPDRVDAFALGDKTPDPSVRTYAEIMKEESLKREREETLREIAKKKKEEEEDKERGG
GRKVEERERDEVPAPVPKRRNRWDQNQDVDAASKKAKTSSSDWDMPDSTPGIGRWDATPT
PGRIGDATPSLSRRNRWDETPTPGRVADATPSAGVTPAATPSGMTWDSTPKLAGLATPTP
KRQRSRWDETPLTIGSATPMLGATPAGPYTPGVTPLGGVELATPTPGAIRQAITPEQYNL
MRWEKDIEERNRPLSDEELDSMFPQEGYKILDPPASYVPIRTPARKLLQTPTPLGTPLYH
IPEENRGQQFDVPKEAAGGLPEMKPEDMQYFAPLLSEVDEETLSPDEQKERKIMKLLLKV
KNGTPPQRKTALRQLTDKAREFGAGPLFNRILPLLMQPTLEDQERHLLVKVIDRVLYKLD
ELVRPFVHKILVVIEPLLIDEDYYARVEGREIISNLSKAAGLATMIAAMRPDIDNIDEYV
RNTTARAFSVVASALGIPALLPFLKAVCQSKKSWQARHTGIKIVQQIAILIGCAVLPHLK
SLVEIIEHGLVDENQKVRTITALSLAALAEASAPYGIESFDSVLKPLWKGIRSHRGKVLA
AFLKAIGFIIPLMDAIYASYYTKEVMFILIREFQSPDEEMKKIVLKVVKQCVSTEGVEAD
YIRSDILPEFFKNFWVRRMALDRRNYRQLVETTVEIANKVGVADIVGRIVEDLKDESEPY
RRMVMETIEKVVANLGASDIDARLEELLIDGILYAFQEQTSDDANVMLNGFGAVVNALGQ
RVKPYLPQICGTIKWRLNNKSAKVRQQAADLISRIAVVMKQCQEEQLMGHLGVVLYEYLG
EEYPEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIA
DRGAEFVPAREWMRICFELLEMLKAHKKGIRRATVNTFGYIAKAIGPQDVLATLLNNLKV
QERQNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGK
DYIYAVTPLLEDALMDRDLVHRQTAASAVKHMALGVAGLGCEDALVHLLNYVWPNIFETS
PHVINAVMEAIEGMRVALGAAAILNYCLQGLFHPARKVREVYWKIYNSLYIGAQDALVAA
YPVLEDEESNVFSRPELVMFV
NT seq 3846 nt   +upstreamnt  +downstreamnt
atggatcccgagatagctaaaacccaagaagagaggaagaggatggagcaacaaattgct
tctctctcaacagttacttttgatactgaattttatgacagtactggaaatcgatacgaa
ggttatgaaagttcaattgctgtaactgaagaagaagaaactgtagatcccagtttatct
gatgttcctagaagattagcttcttatactgcacctcaatcattaatgaaagatattgca
agaagtgctgaagagcataatagtaataataataataataataacaatggctcggggttg
aatgaaacatctagaagaattattgatagagaagatgagtatagaaggagaagattgaac
caagtgctctcacctgatcgagttgatgcttttgcattgggagataaaactcctgatcca
tctgtcaggacttatgctgaaattatgaaggaagaatctttgaaaagagagagagaagag
actttgagagaaattgctaagaagaagaaggaagaagaagaggacaaggagagaggcggt
ggtaggaaggttgaagagagagaaagagatgaggtacctgctcctgtacctaaaagaagg
aataggtgggatcaaaatcaggatgttgatgctgctagtaagaaagccaagacttcttcg
tctgactgggatatgccagattcaactccagggattggaagatgggatgcaacacctact
ccaggaaggattggagatgcaactccttcgctatctagaaggaataggtgggatgaaaca
ccaacccctggtcgggttgcagatgctactccatctgcaggtgtaactcctgctgctact
ccctcgggtatgacttgggattctacacctaaacttgccggtcttgctactccgactccc
aaacgtcaaagatcgagatgggacgagactcctttgaccattggcagtgccactccaatg
ctcggtgcaactccagctggtccgtacactccaggagttacacctcttggaggtgttgag
ctggctaccccaactcctggggctattcgccaagcaatcacacctgaacagtacaatttg
atgagatgggagaaggatattgaagagagaaataggccattaagcgatgaggaacttgat
tcaatgtttccacaagaagggtacaaaattttggatcctccagcatcttacgttccgata
agaactccggccaggaagcttcttcaaactcccactccgttgggtaccccactttatcat
atcccagaagagaaccgtggccagcaatttgatgttccaaaagaagcagctggagggttg
ccagagatgaaaccagaggatatgcagtattttgcaccattgctgagtgaagttgatgaa
gaaacgttgtcgcctgacgagcagaaagagaggaaaatcatgaaactactgctaaaggtc
aagaatggaacacccccgcagaggaaaactgcattgagacagttgactgataaagcgcgt
gagtttggtgcaggcccactctttaacaggatattgccattacttatgcaaccgacgttg
gaagatcaagaacgacatcttctagttaaggttattgatagagttttgtacaagttggat
gagcttgttagacctttcgttcacaaaatccttgtggtgattgagcctcttctgatcgat
gaggactattatgctcgtgttgagggaagagaaattatttccaacctaagtaaagctgct
ggtttggctactatgattgctgcaatgaggcccgatattgataacattgatgagtacgtg
aggaacacaactgcaagggctttcagtgttgttgcttctgctctgggaattccagcgctg
cttcctttcttgaaagctgtctgtcagagtaagaaatcttggcaagctcggcacactggt
atcaagattgttcagcagattgctatcttaattggttgcgcagtacttccccatttgaag
tctcttgtggaaatcatagaacatggtcttgttgatgaaaaccagaaggtcaggaccatt
actgcgctgtcgttggctgccctggctgaagcttctgctccctatggtattgaaagtttt
gattctgtcctgaagcctttgtggaagggtatcagatcacacaggggtaaggttttggct
gccttcttgaaagcaattggttttatcattcccctcatggatgcgatatatgctagttac
tataccaaggaagtgatgttcatattgatccgtgagttccagtctcctgatgaagaaatg
aagaaaattgtgctcaaagtcgtgaagcagtgtgttagtacagaaggtgttgaagctgat
tatatcagaagtgatattcttccggagtttttcaagaacttttgggtgagaagaatggcg
ttggaccgtagaaactataggcagctagtggaaaccaccgtggagatcgcaaacaaggtt
ggtgttgctgatatagtgggaagaatcgttgaggatcttaaagatgagagtgaaccttac
agaagaatggtgatggaaactattgagaaggtggttgcgaacttgggtgcatctgatatc
gatgcacgcttggaagaacttcttattgatggtatactgtacgctttccaggagcaaact
agtgacgatgctaatgttatgttgaatggatttggggctgttgtgaatgccctggggcag
agagtgaaaccctatcttcctcagatatgtggtaccattaaatggcgtttgaacaacaag
agtgcgaaggttagacaacaagcagcagatctcatttctaggattgctgttgtgatgaag
caatgccaagaagagcagctgatgggtcatctcggtgttgtcttgtacgagtacttggga
gaagagtaccctgaagttctgggatccattttaggagctctgaaggcaattgtgaatgtt
ataggaatgacaaagatgacaccgccaatcaaagatctgcttcctcgattgactcctatt
ttgaagaaccgacatgaaaaagttcaagagaactgcattgatcttgttggtaggattgcc
gatcgtggagctgaattcgttcctgcgagggagtggatgagaatatgttttgagcttctt
gaaatgctaaaagcccacaagaaaggaattcgaagggctactgtcaacacatttggatac
atcgcgaaagccattggaccccaagatgtcctggcaacattgttgaacaacctcaaagtg
caggagcgtcagaaccgtgtatgcacaactgtagctattgcaatagttgcggaaacttgt
tctccattcacagttctgccagctcttatgaatgagtatcgtgtgccagagctgaatgtg
cagaatggcgttttaaaatcactttcgttcttgttcgagtatattggcgagatggggaag
gattatatatatgctgtgactcctcttcttgaagatgcgttaatggatagggatctggtt
cacaggcaaacggcggcctccgctgtaaagcacatggctttaggcgtggcggggttaggc
tgtgaagatgctttagttcatcttctgaattatgtctggccgaatatatttgagacttct
ccccatgttattaatgctgtaatggaagcaattgaaggaatgagagttgccttaggggct
gctgcaattttgaattactgtttgcagggactttttcatccagcacggaaggtcagggag
gtgtattggaagatttacaactcgctgtacattggagcgcaggatgcccttgtagctgcg
tacccggtgttggaggatgaggagagcaacgtatttagcaggccggagttggtgatgttt
gtatga

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