Papaver somniferum (opium poppy): 113301216
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Entry
113301216 CDS
T05758
Name
(RefSeq) protein CHROMATIN REMODELING 35-like
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113301216
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113301216
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
113301216
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_16
zf-CCHC_2
Motif
Other DBs
NCBI-GeneID:
113301216
NCBI-ProteinID:
XP_026405749
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Position
8:complement(56422316..56429327)
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AA seq
957 aa
AA seq
DB search
MKQSRSNEIYSRCSKRRTDDHSDPFSIPNLMEELDKDNIYGSVAKEIQALHARKLKLLSP
FREQYPSLFSYPVNSAAQSPTGGLKRNSNLSSQSIIDLNSEDKVDVSAAISAEGMQTNSS
QNIFLTPESNNVLVVDNSDEENGQQIGSKSGYSYNLKFAKMTHDCNYSDLQMSGAEQQVG
SPMQTSYRAKQERRENSTSQWDNQVIKPAGEQRNPSYDSQLIFLKKPDGETPTKDVLGGD
QRKRKGEKEGNIGNCSETPIEKSIGVYLGVQDGLMSSSQSGGHSGGDDELVDIWKEMSVA
LECSKDASFTLGTAVEHNTLEEEGKECEHSFVLRDDLGYVCRICGVIEKRIEQIFDFQWG
KGRKITRGSCMSQSRDAKDGKQVEGSQFTIQSPLDQNFGVADISVHPRHRKQMKPHQLEG
FNFLLRNLVSDHSPGGCILAHAPGSGKTFMIISFMQSFLAKYPDARPLIVLPKGILGTWK
KEFERWQVEQIPLYDLYTSSKSDSRAQQLNVLKQWVEHKGILFLGYQQFASIVSNSTSSS
AAEACHDILLKVPTLLILDEGHTPRNETTDVLYSLSQVQTPLKVVLSGTLFQNHVKEVFN
ILNLVRPKFLKLDTSKAVVRRVMSRVQIAVRKRIKSRGADTMFYDLVEETLQNDQDFRRK
VTVIKDLREMTGKVLHYYKGDFLDELPGLVDLTVLLTLNPKQKHAVEEIRKLDKFKRSSM
GSAAYVHPQLKEYSESCTTGEKGHINEAKIDELLNKVEITDGVKAKFFLNILALCESSGE
KMLVFSQYLLPLKFLERLVVKIRGWSLGKEIFVISGDSSQEQREISMECFNHSKYAKVFF
GSIKACGEGISLVGASRLVILDIHLNPSVTRQAIGRAFRPGQTKKVYAYRLVAADSPEEE
DHHTCFQKELISKMWFEWNEICGYHDFEMEEVNTKDLDDSFWDRPSLGEDVKALYKR
NT seq
2874 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaatccaggtctaatgaaatttactcaaggtgttcaaagagaagaactgatgat
cattctgacccattctctataccgaatttgatggaagaattggataaagataatatatat
gggagtgtcgcaaaggagattcaagctctccatgctaggaaattgaagttgttaagtcct
tttcgggaacagtacccatcactctttagttatcctgtaaattctgcggcacagtctcct
actggtggcttgaaaagaaacagtaacttgtcatctcaaagcattattgatttgaatagt
gaagacaaggttgatgtttcagcagctatttctgctgaagggatgcaaaccaacagcagt
cagaatattttcctcacaccagaaagcaacaatgtactggtagtagataactcagatgaa
gaaaatggacaacagattggaagtaaatcaggttacagttataaccttaagttcgctaag
atgacacatgattgcaattacagtgaccttcagatgtctggtgctgaacaacaagtagga
tctccaatgcagacttcataccgtgcaaaacaggagcgcagagagaattctacctctcag
tgggataatcaagtgattaaacctgctggagaacagaggaatccttcttacgactcccaa
ttgatctttttgaagaagccagatggtgaaaccccaacaaaagatgtacttggaggtgat
caaagaaagagaaaaggtgagaaagaagggaatataggtaattgtagtgaaacaccaatt
gagaaatcaataggtgtatacctgggtgttcaagatggtctgatgagcagctcccagagt
ggtggtcatagcggtggagacgatgaacttgtagatatatggaaggaaatgtcggtagca
ctagaatgttcaaaggatgcttctttcactctgggtaccgctgttgaacataatacacta
gaagaggagggaaaagaatgtgaacattcttttgttctcagggatgatctaggatatgtt
tgtaggatatgtggggtcatagaaaaaagaattgaacaaatatttgacttccagtgggga
aagggaagaaagatcactagaggtagttgcatgtctcagtcacgtgatgcaaaggatggc
aaacaagtcgagggatcccagtttactattcagagtccactggatcaaaattttggtgtg
gctgacatatccgtgcatccaaggcacaggaagcaaatgaagcctcatcaacttgaaggt
ttcaacttcttgcttaggaatttagtgagtgaccacagtccaggtggttgcattctggca
cacgctccagggtctggaaagacctttatgattataagttttatgcaaagcttcctggca
aaatatcctgatgccagaccacttatagtgttgccgaaaggaatattgggtacttggaag
aaggagtttgaaagatggcaggttgaacaaattcccctgtatgacttgtatacttcttca
aaatccgatagtcgagcacaacaattaaatgtcttgaaacaatgggtggagcacaaagga
atcttgtttctcgggtatcaacaatttgcaagcatcgtatctaacagtacaagcagcagc
gctgcagaagcctgccatgatatactccttaaggttcctactttacttattttggatgaa
ggccacacgcctagaaacgagaccacagatgtgctttactccctttcacaggttcaaacc
cctctgaaggtagtattatctggaaccttatttcagaatcatgtgaaagaggttttcaac
attttgaatcttgtgcggccaaagtttctgaagttagatacatcaaaggctgttgtgagg
agggtcatgagtagggtgcagattgctgtcaggaagcggattaagagtcgcggggcagac
acaatgttctatgatttagttgaagagaccctacaaaatgatcaagatttccgaaggaaa
gtcacagtgataaaagaccttcgtgagatgacaggcaaggtgttacactactataaaggt
gattttctggatgaacttccaggacttgttgacttgactgtacttctcactcttaacccc
aaacagaaacatgcagtagaagaaataagaaaattggataagttcaagagaagttccatg
gggagcgcagcatatgttcaccctcaattaaaagaatactcagagagttgcaccacaggg
gagaaaggacacattaatgaagcaaagattgatgagcttcttaacaaagtagaaatcact
gatggtgtgaaagcaaaatttttcttgaatatattggcgctttgtgaatcttctggggag
aagatgttagttttcagtcaatatctgctcccactgaagtttttagagaggctggtggtg
aagattagaggttggagcctggggaaggaaatatttgtcatctcaggtgactcaagccag
gagcagagggaaatatctatggaatgttttaaccattctaagtatgcaaaagtcttcttt
ggttcaataaaggcatgcggggaaggaatatctctagtgggggcatctcgcttagtgatt
ttagatattcatctcaatccgtcagttacccgacaggcaattggtcgtgcattccgacct
ggtcaaacaaaaaaagtatatgcgtataggttggtggcagcagactcacccgaagaggaa
gaccaccatacatgctttcagaaggagttaatttcaaagatgtggtttgagtggaacgag
atatgtggttaccatgattttgagatggaggaagtcaatacaaaggacttggatgattca
ttctgggatagaccttccttaggtgaagatgtgaaggctttgtacaaaaggtga
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