Papaver somniferum (opium poppy): 113304748
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Entry
113304748 CDS
T05758
Name
(RefSeq) general transcription and DNA repair factor IIH subunit TFB5-like
KO
K10845
TFIIH basal transcription factor complex TTD-A subunit
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03022
Basal transcription factors
psom03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113304748
09124 Replication and repair
03420 Nucleotide excision repair
113304748
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
psom03021
]
113304748
03400 DNA repair and recombination proteins [BR:
psom03400
]
113304748
Transcription machinery [BR:
psom03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
113304748
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
113304748
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tfb5
Motif
Other DBs
NCBI-GeneID:
113304748
NCBI-ProteinID:
XP_026409675
LinkDB
All DBs
Position
8:complement(30449704..30451373)
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AA seq
70 aa
AA seq
DB search
MVNSTKGQFITCDIPMAQFIVNMNSTLPATQKSIIHVLDNTHLFVQPHAAEMIRSAISEF
RDKISYEKPA
NT seq
213 nt
NT seq
+upstream
nt +downstream
nt
atggtgaattcaaccaaaggacagttcatcacatgtgacatacctatggcacaattcatc
gtcaacatgaactctacactccctgctacacaaaaatccataattcatgttctggacaac
acccacttatttgtacaaccccatgccgctgaaatgatcaggagcgctatatctgaattc
cgagataaaatctcctacgagaagccagcctga
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