Papaver somniferum (opium poppy): 113330731
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Entry
113330731 CDS
T05758
Name
(RefSeq) protein CHROMATIN REMODELING 35-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113330731
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
psom03400
]
113330731
DNA repair and recombination proteins [BR:
psom03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
113330731
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
AAA_16
Motif
Other DBs
NCBI-GeneID:
113330731
NCBI-ProteinID:
XP_026433347
LinkDB
All DBs
Position
Unknown
AA seq
956 aa
AA seq
DB search
MKSSQTTSLKRRFHQSSSNDKGSRRKTDAVDHSDPFSIPNLKEELDKDRYGSVTKDIEAL
LARKKRELFSPLQEIYFGHTLKSAAESPISGLDGNINLACQSTIDLDSEDEVDVPAAICA
ERTQTHSRRGIFLTPRSNNVLVTFGTDAENGDQIVQKPDYSHDPNHCGLQMSSTEKQVGS
QIQTRYHAKQEHGRNSTTQSDNQGIEPVGAQKKPHYGSQSIFLKKPDGENPAKDVLGSDQ
RNRKVEKEGDRGICGETPIEKSKGVYVGVQDDLMSNSQRSGHSGEDDGLGEIWKEMSLAI
ECSKDSSLPLSTAIEHTAAEEEGEEECEHSFILKDDLGYFCRICGVVEKRIEQIIDFQWG
KGLKTTRCSYMSQSRNVKDGKQVEGSKLTVQNLMDQDFGVADISVHPRHMKQMKPHQLEG
FNFLLGNLVCDSPGGCILAHAPGSGKTFMVISFLQSFLAKYPDARPLVVLPKGILGTWKR
EFKRWQVEEIPLYDLYSSKVDSRAEQLVVLKQWVERRGIMFVGYQQFAIIISNSTSSTSA
AACHEILLKVPTLLILDEGHTPRNESTDLLYSLSQVQTPRKVVLSGTLFQNHVKEVFNIL
NLVCPKFMKLDTPKAVVRRVMSRVQIGPRKQINKSGGAGTLFYDLVEETLQNDQDFRRKV
TVIQDLREMTSKVLHYYKGDFLDELPGLVDLTVVLTLSAKQKLAVQKLKKLEYFKRSSMG
SAVYVHPQLKEFSESYATGDRGHINEAKIDELLSKLDVADGVKAKFFLTILGLCESAEEK
LLVFSQYRLPLKFLERLVVQTKGWILGKEIFCISGDSSQDQRELSMDRFNTSQDAKVFFG
SIKACGEGISLVGASRLLILDIHLNPSITRQAIGRAFRPGQTKKVYAYRLVAPDSPEEED
HDICFRKELISKMWFEWSEICGYHDFSMEQVDKKDLGDAFWNSCSFGEDVKALYRR
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcaagccaaactacttctcttaaaagaagatttcatcaatccagctctaatgat
aaaggttcaagaagaaaaactgatgctgttgatcattctgacccattctcaataccaaat
ttgaaggaagaattggataaagatagatatggtagtgtcacaaaggatattgaagctctc
cttgctaggaaaaaaagggagttgttcagtcctcttcaggagatatattttggtcatact
ctaaaatctgctgcagaatctccaataagtggcttagatggaaacattaacttggcatgt
caaagcactattgatttggatagcgaagacgaggttgatgttccagcagctatttgtgct
gaaagaacacaaacgcacagcaggcggggtattttcctcacgccaagaagtaataatgta
ctggtaacgtttggcacagatgcagaaaatggagaccagattgtacagaagcctgattac
agccatgatcccaatcactgtggccttcagatgtctagtactgaaaaacaagtaggatcg
caaatccagactcgataccatgcaaaacaagagcacggaaggaattccaccactcaaagt
gataatcaagggattgaacctgttggagcacagaaaaagcctcattacggctcccagtct
atctttttgaagaagccagatggcgaaaacccagcaaaagatgtacttggaagtgatcag
cgaaatagaaaagttgagaaagaaggggatcgaggtatttgtggcgaaacaccaattgag
aaatcaaaaggtgtatacgttggtgttcaagatgatctaatgagcaactctcagaggagt
ggtcatagcggtgaagatgatgggctaggagagatatggaaagagatgtctttagcaata
gaatgttccaaggattcttccttgcccctgagtactgctattgaacatactgcggcagaa
gaggagggagaagaagaatgtgaacactcttttattctcaaggatgatctggggtatttt
tgtaggatatgtggagtggttgaaaaacgcattgaacaaataattgacttccagtgggga
aagggactgaagactaccagatgtagttacatgtctcagtctcgtaatgtgaaggatggc
aaacaagttgaaggatccaagcttactgttcagaatttaatggatcaagattttggtgta
gctgacatatccgtgcatccaaggcacatgaagcaaatgaagcctcatcaacttgaaggt
ttcaacttcttgcttgggaatttagtatgcgacagtccaggtggttgcattttggcacac
gcgccaggatcaggaaagacatttatggttataagctttttgcaaagcttcctggccaaa
taccctgatgccagaccacttgtagtgttacccaaaggaatactgggtacttggaagagg
gagtttaaaagatggcaggttgaagaaatccccttgtatgacttgtatagttcaaaagta
gatagtcgagcagaacagttggttgtcttaaaacaatgggtggaacgcagaggaatcatg
tttgttggatatcaacaatttgcaatcatcatatccaatagtacaagcagcacttctgca
gcagcctgccatgagatactccttaaggttcctactttacttattctggatgagggtcat
acacctaggaacgagagcacagatctgctctattctctttcacaggttcaaactcctcgg
aaggtagtattatctggcaccttatttcagaatcacgtgaaagaagtttttaacattttg
aatcttgtgtgtcccaaatttatgaagctagatacaccgaaggctgttgtgagaagggta
atgagcagggttcaaattggtcccagaaagcagattaataagagtgggggagcaggcaca
ctgttctatgacttagttgaagagaccctacaaaatgaccaagatttccgaaggaaagtc
acagtgatacaagacctacgagagatgacaagcaaggttttacactactataaaggtgat
tttcttgatgaacttccaggtctcgtagatctgactgtagttctcactctcagcgccaaa
cagaaacttgcagtgcaaaaattgaaaaaattggagtacttcaagagaagttccatgggg
agtgcagtatatgtgcaccctcagttgaaagaattctctgagagttatgccaccggagac
agaggacacattaatgaagctaagattgatgagctacttagcaaactagatgttgcggac
ggtgtcaaagcaaagtttttcttgactattttggggctttgtgaatctgctgaggaaaag
ctgctagttttcagtcaatatcgccttccacttaaatttttggaaaggctagtggtgcaa
actaagggttggatccttgggaaggaaatcttttgcatttcgggcgactctagtcaagac
cagagagaattgtcaatggatcgtttcaacacttcacaagatgcaaaagtcttctttggc
tccataaaggcatgtggggagggaatctctcttgtcggggcatctcgcttactgatttta
gacattcatctcaatccctcaattactcgacaggctattggtcgtgcatttcgacctggt
caaacaaaaaaagtgtatgcttataggttggttgcaccagactcacccgaggaggaagac
cacgatatatgcttcaggaaggagttaatttcgaagatgtggtttgagtggagtgagata
tgtggttaccatgacttttcaatggaacaagttgataaaaaggacttgggtgatgcgttc
tggaatagctgttcctttggtgaagatgtgaaagctttgtacagaaggtga
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