Papaver somniferum (opium poppy): 113337155
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Entry
113337155 CDS
T05758
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
psom
Papaver somniferum (opium poppy)
Pathway
psom03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
psom00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113337155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
psom03019
]
113337155
Messenger RNA biogenesis [BR:
psom03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113337155
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113337155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
DUF3819
ARM_Cnot1
CNOT1_HEAT
NOT1_connector
LIME1
Motif
Other DBs
NCBI-GeneID:
113337155
NCBI-ProteinID:
XP_026438629
LinkDB
All DBs
Position
Unknown
AA seq
2447 aa
AA seq
DB search
MVPFGSTASTQIRFLLQSVNDSNFDSVFLELTQFIDYGLESSILLLQSCLVLHHFEGVLE
KSIENPNHILLGTIIRYLLSKPNFSTILCESLRRNNNNSGSSGDDNNNGPVVKSVYVLGP
LVNQLEFTVFERIAFGLALCDSEDVDARRFGQSFCVSHIEEVLSAHHNGNRSIVDCSSEV
IQSIVLFLTRTEGVAKHVDSFMQLVALVERKTNWGSADLAVLTPLRSSDNADEMRNLDMF
YSENDDFDDILEEIEKEMSMADIVKELGYGCTVNDLHCKEMLSLFLPLSEVTISRLLSTI
ARSHGVLEEDGTHSTFCSALGLSPFDDPSLLSTWNVEVLVESIKQLAPDTDWIHVMENLD
HEGLYFPSEGSFSFFMSVYRIACQDPFPLHAICGTVWNNVEGQISFLKYAVSASPEVFTF
EHSARQLVYVDAVHGHKLATGNANQAWICLDLLDVLCQLSETGHAGSIRLMLDYPLKHCP
EVLLLGLSQTNTAYNLLQHEVLSAVFPMVVRNLSRAGVILHLWNINPNVVLRGLLDVQNF
DSEGMIKTFDMCQELKILSRVLDMTPFSFSIKLAALASGKGQINLEKWLNDNLSTYGDTF
FEGCLKFFKEIHVGVPQDVLQHAGAVVIAYLETVPIFIKVLQGHAGQNVSRRHLLEELKK
LHVVFIQNSTKLQNGEVADSSSPDGVYSDDVEGEANSYFHQMFSGQLSTDAMVQMLARFK
ESPDKREQDIYNFMIGNLFEEYKFFPKYPERQLKIVAVLFGSLIKHQLVTHLLLGVALRA
VLDALRKSADSKMFVFGAKALEQFVDRLIEWPQYCNHILQISHLRSTHSELVMFIECALA
SISSSHTESNGGSVVPTDHQGPNPVTLEHVEVSESSWKTKGSSSSVPVQSRPQLSLSPSP
FQVQQRNQVSPDDRHKSAGQLQSVGSAHDAVVGIQKTIVAPPLATVLTSSAPSVPVPVPT
STSFLRTSRVPTTSIPRQQSSTGFGSALNIETLVAAAERRDSPIEVPASETQDRILFLIN
NISSANFETKAKELTEVLNEEFYPWFAQYMVMKRASIEPNYHDQYLKFLDKVNSKVLNKE
IVKATYENCKVLLRSELIKSSSEERSLLKNLGSWLGKLTIGRNQVLRAREIDPKALIIEA
YEKGLMIAVIPFTSKILEPCQSSLAYRPPNPWTMGILGLLAEIYALPNLKMNLKFDIEVL
LKNLGVEMKDVKPTSLLKDRIRELEGNPDFSNKDVMATKPQIIPEVNPPISVEPQADVMI
SSHPGGLLTEDEKMPALTLPERLPSGQGLPVTPSQSPFSVSQIPTPIANIGTDVIVNPKI
SALGLQLQFQRIVPMAMERAIKEIMSPVVQRSVTIAIQTTKELVLKDYAMESDETRIYNA
AHLMVASLAGSLAHVTCKEPLRVSISSHLRNMIQPLNISNDLEQAVQISTNDNLDLGCAV
VEKAAIEKALQTIDGEIAGQLAVRRKRRDAVGAAYFDAATYTQGPMGGVPEALRPKPGRL
SLSQQRVYEDFVRFPWQNQPSQSSNALPAVQSSFAGGSGSSSLPRSYGPASGQPNPTLYS
STQGDPGFGSVVQPLALVSEDVDTASAQILSASSAHIGASDVVSQHGSDIDSVVPSFPST
IVSTEPISVDPSDSTKDSGASAQPLPESFGTEHLSTSVGDLLSTEDVLEKYHIVAQKIED
LISKDSKDVEIQGVIVEVPEIILRSVSRDEAAVVVARDVFKSICGNISNNTHVGAQISIL
VALRDVCKVAVKEQLTGLVIYSEDEYKFNKDIIVGLIRSELLNLAEYGMHMAKLIDAGRN
TTATEFAISLLQALVTQESGVGVSELHNLIEALAKLTTRPGSPESLPQLLEIARDVSANA
LAPSGYMVSNDEKANQSRKAPSVRSSVSRGDDYSNVESMTADPHGFREQVTLLFNEWYRI
CDATGTNDAAVTRFVSQLQQSGLLKGDDMTDRFFRLLTELSVAHCLSTEVFTPGSLSLQS
SQQAPALSFVAIDMYAKLVVLILKYCALDQGSNKLFLLPKILLVSVRAIQKDADERKIAF
NPRPYFRLFVNWLLDLGSSDSVLEGANFQILTAFANAFHALQPLKVPGFSYAWLELVSHR
SFMPKLLYGNSQKTSPYVQRLLVDLFKFMEPYLRNAGKSQLGDPVHFLYKGTLRVLLVLL
HDFPEFLCNYHFSFCDVIPPSCIQMRNVILSAFPRNMRLPDPSTPNLKIDLLAEISQSPC
IFSDVDAAVKAKQMKGDIDEYLKTRQQGPSFLAELKQRVLLSQGEAALAGTRYNVPLMNS
LVLYVGMQAIQQLQTKTPPSPQMTHTAPMDIFLVGSAMDIFQTLIGDLDTEGRYLFLNAV
ANQLRYPNNHTHYFSFVLLYLFAEANQEAVQEQITRVLLERLIANRPHPWGLLITFIELI
KNPRYNFWTCSFTRCAPEIEKLFESVSRSCGGPKTPDESLVSDGGAH
NT seq
7344 nt
NT seq
+upstream
nt +downstream
nt
atggttccattcggatcgacagcttcaactcaaatacgattcctactccaatccgtaaac
gattccaacttcgattcagtattcctcgagttaactcaattcatcgattacgggctcgaa
tcaagtattttgctactccaatcctgcttagttcttcatcatttcgaaggagtgttggaa
aagagtattgaaaaccctaatcatattctccttggaacgattatcaggtatctgttatct
aaacctaatttcagtacaatattatgcgaatcgcttcgaagaaacaacaacaactctggt
agttcaggtgatgataataacaatggccctgttgtgaaatccgtgtatgttcttggacct
ctggtgaatcaattggagtttacagtttttgaaaggattgcatttggtcttgcattgtgt
gattctgaagatgtagatgctaggagatttgggcagagtttctgtgttagtcatattgag
gaagtattgagtgcacatcataatggtaatcgatcgattgttgattgttcgagtgaggtg
attcagagtattgtgttgtttctcactcggacggaaggtgttgccaagcatgtggattcg
tttatgcagctggtggcattggtggagaggaagaccaattgggggagtgcggatttggct
gtgttaactccattgcgtagttcagataatgcggatgagatgaggaatttggatatgttt
tatagtgaaaatgatgacttcgatgatattttggaggagatagagaaggagatgagcatg
gctgatattgttaaggaactgggttatgggtgtactgttaatgatttgcattgcaaagaa
atgctttctctgtttttacctctcagtgaagttacaatatcgaggttactaagcacgatt
gcacgctcacatggcgtcttagaggaggacggcacacattcaactttttgctctgcactt
ggattaagtccatttgatgatccatcattgttgagcacgtggaatgtagaagttcttgta
gaatcgatcaagcaacttgctcctgataccgactggatacatgtgatggaaaaccttgac
cacgaggggttgtacttccctagtgagggttcattttcttttttcatgtctgtttacaga
attgcatgccaggatcccttccctcttcatgccatatgtgggactgtatggaacaatgtt
gaaggtcagatatcttttctgaaatacgccgtttctgcatcccctgaagtattcacgttt
gagcactccgccagacaactggtgtacgtcgatgcagtccatggtcataagcttgcaact
ggaaatgcaaatcaggcttggatatgtcttgacctgttagatgttttatgccaactttct
gagacaggccatgcaggctccattcgattaatgcttgactatcctctcaaacactgtcct
gaagtcttgctgcttggattatcccagactaatacggcttataacctacttcaacatgaa
gttctttcggctgttttccccatggtagtccgaaatttatcaagagcaggtgttattctc
cacctatggaacattaatcctaatgtcgtcttgcggggtcttttagatgtccagaacttc
gactcggaggggatgattaaaacttttgacatgtgccaagagcttaagattctatctcga
gtgctggatatgactccattttcattcagtataaagttggctgctcttgcttctgggaag
ggacaaataaatctggagaagtggttgaatgataatttaagcacatatggagacactttt
tttgaagggtgcctcaagttcttcaaagagatccatgttggcgtaccccaagacgttctt
caacatgctggtgctgtagtaattgcttatttggagacagttccaatattcattaaggtt
cttcaaggtcatgctggacagaatgtctcacgtcgtcatctactcgaggaattgaaaaaa
ttgcatgtggtatttatccaaaatagtactaaactgcagaatggtgaagttgccgattca
tcttcacctgatggagtatattcagatgatgtagagggagaagctaattcatacttccac
cagatgttctctgggcagttgagcacagatgcaatggttcagatgcttgctcgtttcaag
gagtctcctgacaaaagggaacaagatatctataattttatgataggaaatctgtttgag
gagtacaagtttttcccgaaatatcctgaaaggcagcttaaaattgttgctgttctcttt
gggtctcttataaagcaccagctcgtgacccatcttttgcttggtgttgctcttcgtgca
gttttggatgcgttgcgtaaatctgcagattcaaaaatgtttgtatttggggcgaaggca
ttggagcagtttgtagatcgtttgatagagtggcctcagtattgcaatcatatcctgcaa
atttctcatcttcgttcaacccattcagagctcgttatgtttatcgagtgtgctcttgcc
tctatctcatccagccacacggagtctaatggaggcagtgttgttcctacagatcatcaa
ggaccaaatccagttaccttggaacacgtggaggtctccgagtcctcgtggaagacaaag
gggtctagcagcagcgtccctgtacagtctaggccgcaactatctttatctccatctcca
tttcaggttcaacagcgaaatcaagtttctcctgatgatagacataaatccgctggacaa
ctgcagtcagttggttcagcccatgatgctgtagttggtattcagaagactattgttgca
ccaccattggctactgtgctcacttcgagtgcacccagcgtgcctgtccctgtgccaacc
tccacaagctttctgcgtacttctcgggtaccaactaccagtatacccagacaacagtct
agcaccggctttggctctgcactaaacatcgaaacacttgttgctgctgctgaaagaagg
gatagtcccattgaggttcctgcatctgagactcaagacagaatattatttttgattaat
aatatttcatcagcaaattttgaaacgaaagcaaaagagttgactgaggttttgaatgaa
gagttttatccatggtttgctcaatatatggtgatgaaaagagctagcattgagcctaat
taccatgatcaatatctgaagttcttggataaggttaactctaaagtcttgaacaaggag
attgttaaagctacttatgagaactgcaaggtcctattaagatccgagcttataaagtct
agttcagaagaacgctcgttgctgaaaaatctcggtagttggcttgggaagcttacaatc
ggcagaaaccaagtgctaagggctagggaaatagatccaaaagctctgataatcgaggct
tatgagaaggggttgatgattgcagtgattcctttcacctcgaagattctggaaccatgc
caatccagtcttgcatatcgacccccaaatccttggaccatgggaatacttggtttactt
gctgagatttacgcactaccaaatctaaagatgaacctcaagtttgacattgaggtctta
ttgaagaatcttggtgttgaaatgaaagacgtcaagccgacctctcttctgaaagatcgc
attagggaacttgaaggaaatcctgacttctccaacaaagatgtcatggccaccaagccc
caaataattcctgaagtcaatccgccaataagtgtcgagccacaggcagatgttatgatt
tcatctcatcctgggggtctattaaccgaggatgaaaagatgccagctttaactttaccc
gagcggcttccttctggccagggactaccagtcactccatcgcagtcaccattttctgtt
agtcagattcccacaccaattgcaaacattggaaccgatgtcattgtcaacccgaagata
agtgcattgggtcttcagctgcagtttcagagaattgttcccatggcaatggaaagggcc
atcaaggagataatgtcccctgttgttcagcgaagtgtaactatagcaattcaaacaacg
aaagaacttgttctgaaggactatgctatggagtccgatgagacccgcatatataatgct
gctcacctgatggttgccagtctcgctggaagtctagcacatgtcacctgcaaggagcct
ctccgtgtttctatttctagtcacttgaggaatatgatccagcctttaaatatttccaat
gaccttgaacaagctgtacagatcagtacgaacgacaatcttgatttgggttgtgctgtg
gttgaaaaggccgctattgagaaggcgttgcaaacaattgacggtgaaatagccggacaa
ctggctgtaagaaggaaacgcagagacgctgtaggtgccgcgtattttgacgcagccact
tatacacagggtcctatgggtggagtgccggaggcccttcgtcctaaacctgggcgttta
tctctctcccagcaacgagtttatgaggattttgtaaggtttccatggcaaaatcaacct
agtcaaagttcaaatgcactgcctgctgttcaatcttcatttgctggtggttctggtagt
tccagcttgcctcgttcttatggcccggcttcaggtcagccgaatcctactttatattca
agtactcaaggagatccaggatttggttcagtcgtgcaaccccttgctcttgtttccgag
gacgtggacaccgcttcggcgcagattcttagcgcttcgtcagctcatattggggcatct
gatgtggtatcgcaacatggttcggacattgattctgttgttccttcatttccttcaaca
attgtttcaactgaaccaatttctgttgatccctctgattctacgaaagactcaggagcc
tctgcacaaccattacctgaaagttttggtacagagcacttgagcactagtgtgggagac
cttttatctactgaggatgtgttagagaagtaccacattgtggcgcaaaagattgaagac
cttatatctaaagattctaaagatgtggaaattcaaggagttattgttgaggttcctgaa
attatacttagatctgtaagccgagatgaagctgctgtggttgtggcccgagatgttttt
aaaagtatatgcgggaatatctcgaataatactcatgtaggtgctcagatttcaattttg
gttgctcttcgagatgtttgtaaggttgctgtgaaggagcagcttacaggtttagtgatt
tattccgaagacgagtataagttcaacaaagatatcattgttggcctcattcgttccgaa
ttacttaacctcgcggaatatggtatgcatatggcaaagcttattgatgcaggacggaat
acaactgctacggagtttgcgatatctcttctgcaggccttagttactcaggaatctggt
gtcggtgtctctgagctccacaatctcatagaggcactggctaagcttactacaagacct
ggatcccctgaatctttaccacaacttcttgagattgccagggatgtctctgctaatgcc
cttgctccgtcaggctatatggtgagcaacgacgagaaggcaaatcaatctagaaaggct
ccatctgtacgttcatctgtaagtaggggggatgactacagtaatgttgagtctatgaca
gcagatcctcatggcttccgtgaacaggttacattgcttttcaacgaatggtatcgaatt
tgtgatgctactggtacgaatgatgcagctgtcacccgttttgtgtcacagttgcagcaa
agtggactgctcaaaggtgatgatatgacagatcgttttttccgcctgcttacagaatta
tcagtagcacactgcttgtccactgaggtgtttactccaggctcattgtcgctgcaatcg
tctcagcaagctccagctctgtcatttgttgctattgatatgtatgccaaacttgtggtt
ttgatcctgaagtattgtgcattggatcagggatcaaataaactatttctcctccccaag
attctgttggttagtgtaagagctattcaaaaagatgctgatgagagaaagatagcattt
aatccgaggccatatttcagattgttcgtgaactggcttctggatcttggttcttctgac
tctgtgcttgagggtgccaactttcagattctgacagcatttgcaaatgctttccacgca
ttgcagcctctaaaagttcctggtttcagttatgcatggctggagttggtgagtcacagg
agttttatgccaaaattgctttatggaaattctcagaagacttcgccctatgtccagcgc
ttgcttgtagatttgttcaagttcatggaaccgtacttgagaaatgctggaaaatctcag
cttggagatcctgttcacttcctctataaaggcactttgcgtgttctgctggtgcttctt
catgattttccggagttcctctgcaattatcatttcagcttctgcgatgtcatcccgccg
agctgcatccagatgcggaatgttattcttagtgcatttcctcgcaacatgaggctgcct
gacccttccaccccaaacttgaagattgatttgttagctgaaataagccaatcaccgtgc
attttctctgatgttgatgctgcagttaaagcaaagcagatgaagggtgatattgatgag
tatctcaagacaaggcaacaaggaccgtcattcttggcagaactgaagcagagagtgctg
ctttctcagggcgaggcagcacttgctgggaccaggtacaatgtaccattgatgaattcc
cttgttctttatgttggcatgcaggctatccagcaactgcagaccaagacgccaccttca
ccacaaatgacacatactgcaccgatggatattttcttggtgggttctgcaatggatatc
ttccaaactctgattggtgatcttgacacagaaggtcggtacctcttcctaaatgcagtt
gcgaatcagttgcgctaccccaacaaccacacacactatttctcctttgtcctgctctat
ctatttgctgaagccaaccaggaggcggttcaggagcagataacaagggttctattggaa
cgcctgattgcgaaccgtcctcatccatggggcttgcttatcacttttattgagctgatt
aagaatccgagatacaacttctggacctgctccttcacgagatgtgcacccgagattgaa
aagctgtttgaatctgtctcaagatcttgtggcgggccgaaaactccggatgagagtttg
gtatctgacggcggtgcacactga
DBGET
integrated database retrieval system
