Polyodon spathula (Mississippi paddlefish): 121295606
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Entry
121295606 CDS
T07273
Symbol
tsen54
Name
(RefSeq) tRNA-splicing endonuclease subunit Sen54 isoform X1
KO
K15326
tRNA-splicing endonuclease subunit Sen54
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121295606 (tsen54)
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing endonuclease complex
121295606 (tsen54)
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GFIT
Motif
Pfam:
tRNA_int_end_N2
tRNA_int_endo_N
Motif
Other DBs
NCBI-GeneID:
121295606
NCBI-ProteinID:
XP_041076402
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Position
20:complement(20945929..20962668)
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AA seq
532 aa
AA seq
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MADCAEKGSASACENEYWSGEVLSPSELFAARTRDHKLPARGQKDFLPDGSQRQGEKLRR
GLEEHWKLVSEERVERQGSLVKAEWKPKDNVVVLKCPAGKFWQTMGYSEEGKQFLQCEEA
LYLMECGNVEVFYRELPLSVQEGYELMLSNRTISLQQYQVFSHLKRLGYIVKRFDASAVP
SLYERQLNLLQRRDKADRRHRKRKRSRSPSNSKDTPEGQSQTGENTEQKAQEDAMSSRED
SQKSGSSTCVIPPERAAACSMEVKQEGTSEERSCWWDFPLVPQSEQTEDRQPHSSQPSGL
KWDFARISFPNLGLDCPLTSLQAPDPVLLPSAVPARACDASAWLQRLNLRDEHLSRRERE
QKDRERHYKRGVNEDREVRSCRNWQDYKELLQRRSRQSCRNWPAHLWNEAVKPLTAPGQA
TSTGDLLQQIGLMQPSRLLDEAAGLVEDSGGMKISFDVYQANTVAEFKKSNPGKPYSRMC
VCSFDGPVPDLRTLKRLAFQSGDVQVTYAVVDNGDISFYSFKDFQLPTDCCH
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atggcggactgcgctgagaagggctctgcaagtgcttgtgagaatgaatactggtctggt
gaagtgctcagtccctcagagctgtttgcggctcgcacccgggaccacaagctccctgcg
cgaggccagaaggactttctccctgacgggtcccagcggcagggtgagaagctgcggaga
ggcctggaggagcactggaaactggtctccgaggagcgtgtcgagaggcaggggagtctg
gtgaaagcagaatggaagcccaaagacaatgttgtggtactcaaatgtccagcggggaag
ttttggcagaccatgggctactctgaagaggggaagcagtttctccagtgcgaggaggcc
ctgtacctgatggagtgtgggaatgtggaggtgttttacagagagctgcctctgtctgtt
caggagggttatgagctgatgctgtcaaacaggacgatctccctgcagcaataccaggtg
ttcagtcatctgaagagactgggttatatagttaaaagatttgatgccagtgccgttccc
tccctgtatgagagacagctgaacctgttgcagagacgagacaaggccgacaggcgccat
cgaaagagaaagaggagccgcagccccagcaattccaaggatactccagaaggacaaagc
cagactggagagaatactgaacagaaggcacaggaagatgccatgagcagcagagaggac
agccagaaatctgggtctagtacttgcgtgatcccacctgaacgggctgctgcctgcagc
atggaggtgaaacaggaaggtacctctgaggagaggtcttgttggtgggacttccccctg
gttccacaatcggagcagacagaagacaggcagccacactcttcacagccctccgggctc
aagtgggactttgcaagaatctcctttcccaatctgggcttggactgccctctcaccagc
ctgcaagccccagaccctgtcctgctgcccagcgctgtccctgccagggcctgcgatgcc
tcggcctggctgcagaggctgaatctcagagacgagcatctgtcgaggagggagagggag
cagaaggacagggagaggcattacaagagaggagtgaacgaggacagggaggtgcggagc
tgccggaactggcaggactacaaggagctgctgcagagaaggagccgacaaagctgtagg
aactggccggctcacctttggaacgaagctgtcaagccactcactgctcctggacaggcc
acctccacaggtgacctgctgcagcagattggtttgatgcagccttctcgactgcttgat
gaagctgccgggcttgtggaggattcgggaggaatgaagatttcctttgatgtctaccag
gcgaacactgtagctgagtttaagaaaagcaatccagggaaaccctactcaaggatgtgt
gtctgcagtttcgacgggccagtgccagacttgcggaccctaaagagactggcttttcag
agcggggatgtgcaagtgacctacgccgtggtggacaatggagacatctccttctactcc
ttcaaggatttccagctacccactgactgctgccactga
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