Polyodon spathula (Mississippi paddlefish): 121296859
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Entry
121296859 CDS
T07273
Name
(RefSeq) CAP-Gly domain-containing linker protein 1-like isoform X1
KO
K10421
CAP-Gly domain-containing linker protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
121296859
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121296859
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121296859
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Microtubule-associated proteins
121296859
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Cytoplasmic linker proteins (CLIPs)
121296859
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLIP1_ZNF
CCDC39
ATG16
ERM_helical
Motif
Other DBs
NCBI-GeneID:
121296859
NCBI-ProteinID:
XP_041078659
LinkDB
All DBs
Position
22:26127726..26155361
Genome browser
AA seq
1715 aa
AA seq
DB search
MELERDLKSQMREVSELRHRLEASRGSGESDIAAPLLDELSSLRDQLSSVSKDHQIELRA
LKEKLESSEKAREAELAQLQTDREKLSKENESLKSKLNQARQENSDVIELWRSKLESASA
LHQQTMEELKMSFSKGASGQATELVELKSTVEKLKQDQKMKLENIRAKHVAENSVCFKEI
EVLKTKLLEVTEEKEKLVENLKTNLEDIEEQHLVEMEDALNKLHNTEEKKQHLDGTAEDH
KKVQQTMQASLEKLSEKDEQCSSLSKEVEALKTKLVEMERKMKSSEERAEQLTKDKAKLE
SDITETMRSSGDSSAQLTKMNDELNQKERKLEQLQTQLSEANEKAAQMEESLKQATCKAE
QIQLEMSRNHQAEVKSMQQRLGEMEQKIEKSIAQNKDLQATHEKTLSEVAVQNKQFVDEL
KQKAQQSDQALASAQGRIGEMEAVIAELKQHKEQAASLTSELASAKAVVEQLTEDVRELN
SEKNKFMLEGEKLRSERDLLVEKISDVEMKYSDLEKKHQSLLSQSEELRVEKEGVLKEKE
ELQSRNQQLEQEKGALTSDKEQLAQEVENLKAEIEKSAAETESLQTTKLELMSKVEEFQK
SIEARKVDLLKYQQEIKHENTAKQNLLAENEEITKQKDDILEELKRTQEKATQDHKKLVE
EREAVEGQKKVLEVAHSELKGQHSALETEREHLAQINSKLLLEKEKLEKDKAELDSNLQM
TVLEKDASAAKKEELQSQLNSVKKDLDKSVRDTAELLASKESLAKLLEEIKTSREVTDSE
RVHLLQEKEDLLAAQRRVCAEKEELLREREETSEKLRLLGEEADTTQEKFRQEKEAFGRE
KEALHQKWVELENRFQALLEKKKALESKIESEKDSFMKERADLTEKHEKELSEKAGLALE
RDQLAVNVESLKGELEKSAQENADLRAAKVSLSSLLDQLQQGKEAVESAHVSLQREKDEL
KAQLQKECIEKESLVKEKVDLEEKCQKLEAAASHVQGELTLERDAAQMEKDFLTAQQLEL
RDKVQSLQKEKDDLAVQYKDLLLKKESILKEKEELESQQKHSADEKQSLLAEKDGLVSKI
EELQKEAEALSQENAELHASESSLLKDLDALRSSQEATDSDCTKLMQEKEDLKAAHAKLL
SKNQELLNEKKQLEQTHKDLCEEAATTTKDKEEISARLSDVSSEKEALIKGKEDLESQLK
RSGDEKQDLVAERDGLASKIEELKHEVEALAKEKAGLQASEFSLLRKLEALCSSQQEKED
LQAAHTKLLSENQELLKDKKQLELIYKISCEQSAVTAQEKGEFASRLEEMKTERETLLRE
KREGTMKLTELEALHKSAISKAAKTADQALHSLDQITKEKNDAQASLEETKQTNHKLQQE
LDALKQQNSRFQEELNLSKEQRGSESKRIDDLRKEIEELKLEVSQKSQRLSALQEENVKL
SAELGSSREEVSSHQKLEEERSALNNQLLEMKKSLPNNTLRESLLKKGSNEEKASLEKSI
QKTSALISEKDKELEKLRNEITVLRGENAKTKTLQSAVQSLENDKAKLQEKVQNLEEKLA
ENENKRENNTGSSGDADLEQLREDKDSAESQQDMLDFLNSVIIDLQRKNEELKSKMQTMA
EASLNGNTASELDNYDSFSETQEKKKKKKPAPRLFCDICDCFDLHDTEDCPTQAQMPGTP
PHTAYHGSRRDERPYCDICEVFGHLTNSCNDDETF
NT seq
5148 nt
NT seq
+upstream
nt +downstream
nt
atggagctagagagagatctgaagtcccaaatgagagaggtgtctgagctccgccacaga
ctggaggcttccagggggtcgggcgagtccgacatagctgctccgctgctcgatgaactg
agctctttgagagatcagctctcctccgtaagcaaagatcaccaaatcgaactccgtgcc
ttaaaagaaaaacttgaaagttcagagaaggcacgtgaagcggagctggcccagctccag
actgaccgcgagaaactctccaaagagaacgaatccttgaagagcaaactaaaccaggca
agacaggagaactcggacgtcattgaactgtggcgttcgaagctggagtcagccagcgct
ttacaccagcaaaccatggaagagctcaaaatgtccttcagcaaaggggccagcgggcag
gccacagagctcgtcgagctgaagagcactgtggagaagctgaagcaggaccagaaaatg
aaacttgaaaatatcagagcgaagcacgtcgcggagaactctgtgtgcttcaaagagatc
gaggtcctgaagaccaagctgttggaggtcaccgaggagaaggagaagttggtggagaac
ctcaagaccaatctggaggacatagaggagcagcacctggtggagatggaagacgccctg
aacaagctgcacaacacggaagagaagaaacagcaccttgatggcacagcagaagaccac
aagaaagtccaacagactatgcaagcatcacttgaaaaactcagtgaaaaagatgagcag
tgctcgtccctgtctaaggaggtggaggccttgaaaactaaacttgtagaaatggaaagg
aaaatgaagtccagcgaggagagagcggaacagctgaccaaagacaaggcgaaactggag
agtgacatcaccgaaacgatgaggtcatcgggggacagctccgcccagctcacgaaaatg
aacgacgagcttaatcagaaggaaagaaagctagagcagctgcagacccagctgtcagag
gccaatgaaaaagcagcccagatggaggagagcctcaagcaggcgacgtgcaaagcagag
cagatccagctggagatgagcaggaatcaccaggcagaggtgaaatccatgcagcagaga
ctgggagagatggaacagaaaatcgagaagagcattgcccagaacaaggacttgcaggcc
actcatgagaagaccctctcggaagtggctgtgcagaacaagcagtttgtggacgagctg
aagcagaaggcacagcagagtgatcaagcgctggcgagcgcgcaggggaggatcggcgaa
atggaggccgtgatcgctgagctcaaacagcacaaggagcaagctgcgtctctaacatct
gagctagcatccgcaaaagctgtggttgagcagttaacagaggacgtgagagagttgaac
tccgaaaaaaacaagttcatgctagaaggagagaagctcaggtctgaaagagacttgctc
gtggagaaaatatcggatgtggaaatgaaatattccgacctggaaaagaagcaccagagc
ctgctctcacaaagcgaagagctgcgagtggaaaaggaaggagtgctcaaagaaaaggag
gaacttcagtctagaaaccagcagctagaacaagagaagggagctctgacatcagataaa
gagcagcttgctcaggaggtagagaatctgaaagcagagattgaaaagtcagctgcggag
acagagagccttcagaccaccaagctggaattgatgagcaaagtggaggaatttcagaaa
tcaatcgaggccagaaaggttgatcttctgaaatatcaacaggagattaagcatgagaac
acggctaagcagaatctgttggcagaaaatgaggagatcaccaaacagaaggatgacatc
cttgaggagctgaaacgcactcaagaaaaagcaacacaagaccacaagaagcttgtggag
gaaagggaagcagtggaaggccagaagaaggtgctggaggtcgcacattctgagcttaaa
ggtcaacacagtgctttagaaacagagagggaacatctggctcaaataaactccaagctg
ctcttagaaaaagagaaactagagaaagacaaagcagaacttgactcaaatctgcagatg
acagtcttggagaaagatgcctcagcagccaaaaaagaagagcttcagagccaactgaac
agcgtcaagaaggacctggacaagtcggtccgagatactgctgaactcctagcctccaaa
gaaagcctggctaaactcctggaagaaattaagaccagtagggaggtgacggattcagag
cgggttcatctgctccaggaaaaagaagacctgcttgcagctcagaggagggtgtgtgct
gagaaagaggagcttctgagagagagggaggagacttcagagaagctccgcctgttgggt
gaggaggcagacaccactcaagagaagttccggcaggagaaagaagccttcggaagagag
aaagaggctctccatcaaaagtgggttgaactcgagaacaggttccaggcactgctggaa
aaaaagaaagccctggaatccaaaattgagtctgaaaaggattccttcatgaaggaaaga
gcagatctgactgagaagcatgagaaggagctctcggagaaggcaggcttggctctcgag
agggaccagcttgcagtcaatgttgagagtttaaaaggggaactagaaaagtcggcccaa
gaaaatgccgacctgcgagcagcgaaagtcagcctgtcttccctcttggaccagcttcag
caaggtaaggaggctgttgaatcggcgcatgtttccctccagcgggaaaaagacgaacta
aaagcacagcttcagaaggaatgcatagaaaaagaatcccttgtgaaagagaaggtggac
ctggaagagaagtgtcaaaaactagaagcagcagccagtcacgtgcagggtgagctgact
ctcgaaagggatgctgctcaaatggaaaaggatttcctcactgcccagcagttggagctt
agggataaagtgcagtcgttgcagaaggagaaagatgatcttgctgttcagtataaagac
ctgctgttgaagaaagagtccattcttaaagagaaggaagaactggagtcccaacagaag
cacagtgctgatgagaaacaaagtctgctggctgagaaggatgggctggtgtccaagatt
gaggagctgcagaaagaggctgaagctttgtctcaagagaatgctgagctgcatgcttcg
gagtctagcctcttgaaagacttggatgccctacgcagcagtcaagaggcaactgactct
gattgcaccaagctgatgcaggagaaggaggacctgaaggctgctcatgcaaaactactg
tccaagaatcaggagcttctcaacgagaagaagcaattggagcagacgcacaaggacttg
tgtgaagaagccgcaactaccaccaaggacaaagaagaaatttcagccaggctgagtgat
gtgagcagtgagaaagaagccttgattaaaggaaaagaagacttggagtcccagctaaag
cgcagtggggatgagaaacaagaccttgtggctgagagggacggtctggcttccaagatt
gaggagctgaagcatgaagtggaggctttggctaaggaaaaggctgggctgcaggcctca
gagttcagcctcctaaggaagctggaagcactctgtagcagccagcaggagaaagaagac
cttcaggcagctcatacgaaactgctctccgaaaaccaggagcttctcaaggacaagaaa
cagctggagctgatttacaagatctcgtgcgagcaatctgctgtcactgcacaggagaaa
ggagagttcgcaagcaggctggaagaaatgaagaccgagagagagaccctgctcagagag
aagagggaagggaccatgaaattaacagaacttgaggctcttcacaaaagtgctatttca
aaggctgcaaaaacagctgatcaggctctgcactccctggaccagataaccaaggagaag
aacgacgcccaggcctcgctggaggagaccaagcaaacaaaccacaaactgcagcaagag
cttgatgcattaaaacaacagaactcaaggtttcaagaggagcttaatctgtcgaaagag
caacgcggatcagagagcaagaggatagacgacctccgcaaggaaatcgaggagctaaag
ctggaagtgtctcagaagtcccagcgtctctcagcactgcaagaggagaacgtgaagctg
tctgcggagctgggctcaagccgagaggaagtcagcagccatcagaagcttgaagaagag
cggtctgcccttaataaccagctattagaaatgaaaaagagcttgcccaataatacttta
agagagtctttattaaagaaaggatccaatgaggaaaaggcttccttagagaaatccatc
caaaaaaccagtgccttgatctcagaaaaggacaaagaattggagaagctcagaaatgag
attacagtgttgcgaggagagaatgccaagactaagacactgcagtctgcagtgcagtcc
ctggaaaacgacaaagccaaactgcaagagaaggtgcagaatctggaggagaaactcgct
gaaaacgagaacaagagggagaacaacaccggctcatcgggagatgctgatcttgaacag
ctaagagaagacaaggactctgcagagagccaacaggatatgcttgacttcctcaattca
gtgattatagatctgcagaggaaaaacgaagagctgaagagcaaaatgcagacaatggca
gaagcgtctctcaatggcaatactgccagtgaactggacaactacgacagtttcagtgaa
acccaggagaagaagaagaagaagaaacctgcccctcgtctcttctgtgatatctgcgat
tgcttcgacctccacgacacggaggactgccccacgcaggcgcagatgccaggaactcca
ccgcacaccgcttaccacggcagccggagggacgagcgcccctactgtgatatctgcgag
gtgttcggacacttgaccaacagctgcaacgatgacgagaccttctag
DBGET
integrated database retrieval system
